Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 MIR6082-201ENST00000613604 109 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 AC025521.1-201ENST00000621624 286 ntBASIC1.33□□□□□ -2.2
CTDP1Q9Y5B0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.593-201ENST00000410292 98 ntBASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 RNY4P29-201ENST00000410801 97 ntBASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 MIR4676-201ENST00000583078 72 ntBASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 AC013244.2-201ENST00000603396 103 ntBASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CTDP1Q9Y5B0 MIR494-201ENST00000349529 81 ntBASIC1.31□□□□□ -2.2
CTDP1Q9Y5B0 SNORD114-22-201ENST00000365423 72 ntBASIC1.31□□□□□ -2.2
CTDP1Q9Y5B0 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-1194P-201ENST00000516208 104 ntBASIC1.31□□□□□ -2.2
CTDP1Q9Y5B0 RNU7-156P-201ENST00000517214 74 ntBASIC1.31□□□□□ -2.2
CTDP1Q9Y5B0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-364P-201ENST00000384387 107 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 MIR100-201ENST00000385259 80 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.609-201ENST00000410669 89 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 AC067940.1-201ENST00000458411 300 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 AC062037.1-201ENST00000605302 128 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 IGLL4P-201ENST00000614590 133 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 MIR6734-201ENST00000621166 68 ntBASIC1.3□□□□□ -2.2
CTDP1Q9Y5B0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNY1P1-201ENST00000364372 112 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-820P-201ENST00000384273 107 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNY1P4-201ENST00000384595 115 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-402P-201ENST00000410678 103 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 AC002429.1-201ENST00000437672 148 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RN7SKP12-201ENST00000516275 143 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-977P-201ENST00000516411 103 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 RNU6-765P-201ENST00000516916 99 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 MIR4668-201ENST00000582284 70 ntBASIC1.29□□□□□ -2.2
CTDP1Q9Y5B0 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 Y_RNA.388-201ENST00000383919 113 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 SNORD100-201ENST00000408573 76 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 MIR548H5-201ENST00000580314 60 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 RNU7-10P-201ENST00000607194 63 ntBASIC1.28□□□□□ -2.2
CTDP1Q9Y5B0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 MIR635-201ENST00000384830 98 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 MIR516A2-201ENST00000384888 90 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 MIR516A1-201ENST00000385033 90 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.536-201ENST00000384621 113 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-243P-201ENST00000391140 107 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-1254P-201ENST00000391266 104 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-519P-201ENST00000410590 108 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 SNORD63B-201ENST00000411005 70 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 MIR4804-201ENST00000581683 73 ntBASIC1.26□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-369P-201ENST00000362515 102 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.56-201ENST00000362798 112 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-219P-201ENST00000364728 107 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-675P-201ENST00000384236 104 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 RNU1-119P-201ENST00000391122 165 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.620-201ENST00000411009 88 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 RNU7-102P-201ENST00000458948 62 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 snoU13.18-201ENST00000459483 104 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 RNU6-267P-201ENST00000516714 103 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.25□□□□□ -2.21
CTDP1Q9Y5B0 MIR520F-201ENST00000384824 87 ntBASIC1.24□□□□□ -2.21
CTDP1Q9Y5B0 AL161932.1-201ENST00000437408 146 ntBASIC1.24□□□□□ -2.21
CTDP1Q9Y5B0 RNU7-106P-201ENST00000459514 67 ntBASIC1.24□□□□□ -2.21
CTDP1Q9Y5B0 SNORD36A-201ENST00000362874 73 ntBASIC1.23□□□□□ -2.21
CTDP1Q9Y5B0 MIR1827-201ENST00000408549 66 ntBASIC1.23□□□□□ -2.21
CTDP1Q9Y5B0 RNU7-56P-201ENST00000458744 62 ntBASIC1.23□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.648-201ENST00000459455 110 ntBASIC1.23□□□□□ -2.21
CTDP1Q9Y5B0 TRAJ51-201ENST00000504127 63 ntBASIC1.23□□□□□ -2.21
CTDP1Q9Y5B0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 Y_RNA.73-201ENST00000362910 113 ntBASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 AC092628.1-201ENST00000436250 252 ntBASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CTDP1Q9Y5B0 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 RNA5SP173-201ENST00000364857 136 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-535P-201ENST00000384722 107 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 RNU7-195P-201ENST00000458793 62 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 AC022137.1-201ENST00000483735 151 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-448P-201ENST00000517052 107 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 AC008608.1-201ENST00000603910 127 ntBASIC1.21□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-633P-201ENST00000362612 103 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-242P-201ENST00000384359 107 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 RNU6-291P-201ENST00000384720 107 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 FABP5P4-201ENST00000437203 171 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 snoU13.11-201ENST00000459219 104 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.2□□□□□ -2.22
CTDP1Q9Y5B0 AP003327.1-201ENST00000529684 127 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms