Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNA5SP117-201ENST00000365294 118 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 SNORD38.2-201ENST00000384470 69 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 AC092628.1-201ENST00000436250 252 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 MIR548Z-201ENST00000584743 97 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 RNU6-90P-201ENST00000606352 106 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 MIR6767-201ENST00000637302 66 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
VPS50Q96JG6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.8□□□□□ -2.28
VPS50Q96JG6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.8□□□□□ -2.28
VPS50Q96JG6 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
VPS50Q96JG6 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
VPS50Q96JG6 MIR450A1-201ENST00000362262 91 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 MIR590-201ENST00000385008 97 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 MIR1302-5-201ENST00000408164 150 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 AC109327.2-201ENST00000448339 378 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 RNU7-106P-201ENST00000459514 67 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 RNU6-904P-201ENST00000516206 101 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 RNU6-795P-201ENST00000516323 103 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
VPS50Q96JG6 Y_RNA.173-201ENST00000363776 113 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 SNORA51.5-201ENST00000384126 131 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-571P-201ENST00000384128 107 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 MIR635-201ENST00000384830 98 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 SNORD63B-201ENST00000411005 70 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-109P-201ENST00000516364 107 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-184P-201ENST00000516514 107 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-537P-201ENST00000517277 103 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 MIR3678-201ENST00000578455 94 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 MIR548H5-201ENST00000580314 60 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 AC096720.1-201ENST00000604441 183 ntBASIC0.78□□□□□ -2.28
VPS50Q96JG6 RNU6-756P-201ENST00000383997 107 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 MIR516A2-201ENST00000384888 90 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 MIR516A1-201ENST00000385033 90 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS50Q96JG6 RNU6-86P-201ENST00000606534 107 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 AC012531.4-201ENST00000616509 177 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 MIR6515-201ENST00000619843 57 ntBASIC0.77□□□□□ -2.29
VPS50Q96JG6 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 RNU6-170P-201ENST00000362832 104 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 RNU4-36P-201ENST00000364294 144 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 RNU6-755P-201ENST00000364400 103 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 RNU7-195P-201ENST00000458793 62 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
VPS50Q96JG6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
VPS50Q96JG6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
VPS50Q96JG6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 MIR4777-201ENST00000583710 86 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 AC022709.1-201ENST00000615967 87 ntBASIC0.75□□□□□ -2.29
VPS50Q96JG6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 AL031737.1-201ENST00000450125 223 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 SCARNA23-201ENST00000516060 130 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS50Q96JG6 AC138869.1-201ENST00000568623 124 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
VPS50Q96JG6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 SNORD18A-201ENST00000363753 72 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 SNORD45B-201ENST00000364617 72 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 AC244505.6-201ENST00000452829 130 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 RNU7-10P-201ENST00000607194 63 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 MIR7111-201ENST00000619751 72 ntBASIC0.73□□□□□ -2.29
VPS50Q96JG6 RNU6-766P-201ENST00000362478 107 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 RNU6-147P-201ENST00000383983 107 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 MIR489-201ENST00000384923 84 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 MIR181B2-201ENST00000385004 89 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 MIR599-201ENST00000385069 95 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 RNU6-469P-201ENST00000516253 101 ntBASIC0.72□□□□□ -2.29
VPS50Q96JG6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
VPS50Q96JG6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 SNORA36.1-201ENST00000363424 132 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 SNORD115-24-201ENST00000363528 82 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 RNA5SP94-201ENST00000516917 108 ntBASIC0.71□□□□□ -2.3
VPS50Q96JG6 SNORD36A-201ENST00000362874 73 ntBASIC0.7□□□□□ -2.3
VPS50Q96JG6 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
VPS50Q96JG6 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
VPS50Q96JG6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.7□□□□□ -2.3
VPS50Q96JG6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS50Q96JG6 AC025521.1-201ENST00000621624 286 ntBASIC0.7□□□□□ -2.3
VPS50Q96JG6 RNU6-1113P-201ENST00000384348 107 ntBASIC0.69□□□□□ -2.3
VPS50Q96JG6 MIR519A1-201ENST00000385257 85 ntBASIC0.69□□□□□ -2.3
VPS50Q96JG6 RNU6-644P-201ENST00000391155 98 ntBASIC0.69□□□□□ -2.3
VPS50Q96JG6 AC097635.1-201ENST00000450678 155 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms