Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNPOQ8N3V7 RNU6-369P-201ENST00000362515 102 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 MIR548G-201ENST00000408442 89 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 RNU7-102P-201ENST00000458948 62 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
SYNPOQ8N3V7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 RNU6-813P-201ENST00000384691 107 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 RNU6-162P-201ENST00000516228 103 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 AC090897.1-201ENST00000580909 226 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 RNU6-887P-201ENST00000410660 100 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 SNORA25.16-201ENST00000516741 121 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 RNU6-90P-201ENST00000606352 106 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 RNU6-86P-201ENST00000606534 107 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.96-201ENST00000363092 109 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 SNORD38.2-201ENST00000384470 69 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.558-201ENST00000384685 113 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 MIR7-2-201ENST00000384970 110 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 RNU6-972P-201ENST00000391208 107 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 SNORD99-201ENST00000408612 74 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 SPINT5P-201ENST00000448174 155 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 SNRPGP12-201ENST00000449481 213 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 RNU7-56P-201ENST00000458744 62 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 SNORD73B-201ENST00000364394 72 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 RNU6-762P-201ENST00000517107 102 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 AC026421.1-201ENST00000519101 163 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 AC103810.7-201ENST00000607821 91 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 MIR6515-201ENST00000619843 57 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
SYNPOQ8N3V7 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 RNU6-531P-201ENST00000516694 104 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 MTND5P40-201ENST00000559945 246 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 MIR4500-201ENST00000579472 76 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 AC008608.1-201ENST00000603910 127 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 MIR6082-201ENST00000613604 109 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.17□□□□□ -2.22
SYNPOQ8N3V7 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 SNORD58A-201ENST00000383875 65 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 RNA5SP480-201ENST00000516840 109 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 SNORD92-201ENST00000585078 85 ntBASIC1.16□□□□□ -2.22
SYNPOQ8N3V7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SYNPOQ8N3V7 RNU4-58P-201ENST00000363192 141 ntBASIC1.15□□□□□ -2.23
SYNPOQ8N3V7 MIR1302-4-201ENST00000408701 150 ntBASIC1.15□□□□□ -2.23
SYNPOQ8N3V7 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
SYNPOQ8N3V7 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 SNORD114-26-201ENST00000363543 72 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 SNORD116-10-201ENST00000363791 102 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 RNU6-571P-201ENST00000384128 107 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 MIR548J-201ENST00000408833 112 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.593-201ENST00000410292 98 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 BX276092.1-201ENST00000427368 251 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 RNU6-850P-201ENST00000516934 103 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 MIR8066-201ENST00000617280 78 ntBASIC1.14□□□□□ -2.23
SYNPOQ8N3V7 RNU6-1134P-201ENST00000365156 101 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 MIR181B2-201ENST00000385004 89 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 SNORA72.7-201ENST00000516349 94 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 AL513043.2-201ENST00000573941 143 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 AC013244.2-201ENST00000603396 103 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 AC062037.1-201ENST00000605302 128 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 AC025521.1-201ENST00000621624 286 ntBASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.12□□□□□ -2.23
SYNPOQ8N3V7 MIR598-201ENST00000384868 97 ntBASIC1.12□□□□□ -2.23
SYNPOQ8N3V7 RNY4P29-201ENST00000410801 97 ntBASIC1.12□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.11□□□□□ -2.23
SYNPOQ8N3V7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.11□□□□□ -2.23
SYNPOQ8N3V7 RNU6-480P-201ENST00000384332 107 ntBASIC1.11□□□□□ -2.23
SYNPOQ8N3V7 RNA5SP222-201ENST00000411039 105 ntBASIC1.11□□□□□ -2.23
SYNPOQ8N3V7 RNU6-448P-201ENST00000517052 107 ntBASIC1.11□□□□□ -2.23
SYNPOQ8N3V7 RNA5SP117-201ENST00000365294 118 ntBASIC1.1□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.388-201ENST00000383919 113 ntBASIC1.1□□□□□ -2.23
SYNPOQ8N3V7 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SYNPOQ8N3V7 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
SYNPOQ8N3V7 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
SYNPOQ8N3V7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.09□□□□□ -2.23
SYNPOQ8N3V7 RNU6-219P-201ENST00000364728 107 ntBASIC1.09□□□□□ -2.23
SYNPOQ8N3V7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SYNPOQ8N3V7 RNU6-675P-201ENST00000384236 104 ntBASIC1.09□□□□□ -2.23
SYNPOQ8N3V7 MIR450A2-201ENST00000385022 100 ntBASIC1.09□□□□□ -2.23
SYNPOQ8N3V7 SNORA26.2-201ENST00000390922 122 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms