Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 Y_RNA.30-201ENST00000362572 97 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 SNORD100-201ENST00000408573 76 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 AC109327.2-201ENST00000448339 378 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 RN7SL793P-201ENST00000583259 296 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 AC012531.4-201ENST00000616509 177 ntBASIC1.14□□□□□ -2.23
DDX53Q86TM3 RNU6-170P-201ENST00000362832 104 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNY1P4-201ENST00000384595 115 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNU6-291P-201ENST00000384720 107 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNU6-535P-201ENST00000384722 107 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 SNORD99-201ENST00000408612 74 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 RNU6-850P-201ENST00000516934 103 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 MIR548Z-201ENST00000584743 97 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.13□□□□□ -2.23
DDX53Q86TM3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 RNU6-32P-201ENST00000383948 107 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 RNU6-13P-201ENST00000384248 107 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 RNU6-12P-201ENST00000384604 107 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 RNU6-41P-201ENST00000384741 107 ntBASIC1.12□□□□□ -2.23
DDX53Q86TM3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.12□□□□□ -2.23
DDX53Q86TM3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 AC004941.2-201ENST00000427009 228 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 RNU6-86P-201ENST00000606534 107 ntBASIC1.11□□□□□ -2.23
DDX53Q86TM3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.1□□□□□ -2.23
DDX53Q86TM3 MIR573-201ENST00000384964 99 ntBASIC1.1□□□□□ -2.23
DDX53Q86TM3 MIR216A-201ENST00000385063 110 ntBASIC1.1□□□□□ -2.23
DDX53Q86TM3 MIR548H5-201ENST00000580314 60 ntBASIC1.1□□□□□ -2.23
DDX53Q86TM3 MIR4777-201ENST00000583710 86 ntBASIC1.1□□□□□ -2.23
DDX53Q86TM3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.1□□□□□ -2.23
DDX53Q86TM3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
DDX53Q86TM3 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 MIR635-201ENST00000384830 98 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 AC002350.1-201ENST00000490759 375 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
DDX53Q86TM3 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 AC011195.1-201ENST00000578177 177 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 MIR4439-201ENST00000583746 80 ntBASIC1.09□□□□□ -2.23
DDX53Q86TM3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 AC092628.1-201ENST00000436250 252 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 RNU7-10P-201ENST00000607194 63 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 AP001318.4-201ENST00000616637 121 ntBASIC1.08□□□□□ -2.24
DDX53Q86TM3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 RNA5SP245-201ENST00000364239 121 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 RNA5SP117-201ENST00000365294 118 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
DDX53Q86TM3 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 SNORD63B-201ENST00000411005 70 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 TRAJ51-201ENST00000504127 63 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 RNU6-168P-201ENST00000516189 101 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
DDX53Q86TM3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
DDX53Q86TM3 RNU6-813P-201ENST00000384691 107 ntBASIC1.06□□□□□ -2.24
DDX53Q86TM3 RNA5SP89-201ENST00000410300 108 ntBASIC1.06□□□□□ -2.24
DDX53Q86TM3 MTATP6P29-201ENST00000415057 132 ntBASIC1.06□□□□□ -2.24
DDX53Q86TM3 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
DDX53Q86TM3 uc_338.16-201ENST00000621804 95 ntBASIC1.06□□□□□ -2.24
DDX53Q86TM3 MIR516A2-201ENST00000384888 90 ntBASIC1.05□□□□□ -2.24
DDX53Q86TM3 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
DDX53Q86TM3 MIR516A1-201ENST00000385033 90 ntBASIC1.05□□□□□ -2.24
DDX53Q86TM3 RNU6-644P-201ENST00000391155 98 ntBASIC1.05□□□□□ -2.24
DDX53Q86TM3 RNU7-61P-201ENST00000515897 61 ntBASIC1.05□□□□□ -2.24
DDX53Q86TM3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 RNU6-480P-201ENST00000384332 107 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 MIR181B2-201ENST00000385004 89 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 MTATP8P2-201ENST00000435212 202 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 RNU7-106P-201ENST00000459514 67 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 SNORA40.13-201ENST00000516379 120 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 AC138907.6-201ENST00000568401 126 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 AC138869.1-201ENST00000568623 124 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 AC103810.7-201ENST00000607821 91 ntBASIC1.04□□□□□ -2.24
DDX53Q86TM3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
DDX53Q86TM3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
DDX53Q86TM3 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
DDX53Q86TM3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.03□□□□□ -2.24
DDX53Q86TM3 RNU6-158P-201ENST00000517104 100 ntBASIC1.03□□□□□ -2.24
DDX53Q86TM3 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
DDX53Q86TM3 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms