Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.27□□□□□ -2.61
CSMD3Q7Z407 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 MTND5P5-201ENST00000503764 376 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 AC084781.2-201ENST00000615568 161 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 U6.96-201ENST00000636425 70 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 RNU6-690P-201ENST00000365242 106 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 AC009779.6-201ENST00000603972 165 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 MIR376B-201ENST00000614515 100 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 AL138825.1-201ENST00000618587 192 ntBASIC-1.28□□□□□ -2.61
CSMD3Q7Z407 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MIR513C-201ENST00000401352 84 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MTCO2P19-201ENST00000427513 598 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 RNU6-453P-201ENST00000516819 85 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 U7.5-201ENST00000517224 61 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 AC138907.4-201ENST00000570107 226 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MIR4748-201ENST00000578076 82 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 RNU7-125P-201ENST00000458760 62 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MIR5701-3-201ENST00000578890 82 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MIR5701-1-201ENST00000585138 82 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 MIR5701-2-201ENST00000615634 82 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 AL009048.1-201ENST00000450437 298 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 PISRT1.1-201ENST00000616930 107 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 AP000720.1-201ENST00000625091 483 ntBASIC-1.29□□□□□ -2.62
CSMD3Q7Z407 UBE2WP1-201ENST00000362030 340 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 SNORA63.2-201ENST00000362603 126 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 MIR513B-201ENST00000385136 84 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 MIR1255B2-201ENST00000408618 67 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 RNU6-719P-201ENST00000516671 104 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 RNU6-495P-201ENST00000362995 107 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 SNORD81.1-201ENST00000363064 77 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 MIR451A-201ENST00000385059 72 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 ELOCP20-201ENST00000422460 345 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 RNU6-191P-201ENST00000516295 94 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 SNORA20.3-201ENST00000516880 132 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 AC090617.8-201ENST00000623339 167 ntBASIC-1.3□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 RNU7-2P-201ENST00000516096 62 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 AC113618.1-201ENST00000416747 285 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 SNRPGP8-201ENST00000454064 226 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 SNORD42B-201ENST00000458893 67 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 RNU6-764P-201ENST00000516396 105 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 Z83846.1-201ENST00000446798 265 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 AL512360.1-201ENST00000555346 234 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 MIR4536-1-201ENST00000583537 88 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.31□□□□□ -2.62
CSMD3Q7Z407 MIR376A1-201ENST00000616574 68 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 AC048344.4-201ENST00000619744 527 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 MIR6888-201ENST00000621977 67 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 MIR122-201ENST00000385044 85 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 SNORD11.1-201ENST00000459482 85 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 RNA5SP147-201ENST00000516493 109 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 AL050303.3-201ENST00000613704 284 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 MTATP6P29-201ENST00000415057 132 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 AL365265.1-201ENST00000621045 234 ntBASIC-1.32□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 PMCHL1-202ENST00000423102 261 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 AC099799.1-201ENST00000439809 192 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 MRPS35P2-201ENST00000508242 191 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 AC009094.1-201ENST00000564443 426 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 RNU4-69P-201ENST00000410677 143 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 AL035461.1-201ENST00000421490 332 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 FTX_4.1-201ENST00000616291 147 ntBASIC-1.33□□□□□ -2.62
CSMD3Q7Z407 RNU6-845P-201ENST00000362578 103 ntBASIC-1.34□□□□□ -2.62
CSMD3Q7Z407 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.34□□□□□ -2.62
CSMD3Q7Z407 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.34□□□□□ -2.62
CSMD3Q7Z407 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.34□□□□□ -2.62
CSMD3Q7Z407 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.34□□□□□ -2.62
CSMD3Q7Z407 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms