Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNA5SP264-201ENST00000363115 107 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNORD113.1-201ENST00000363280 73 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNORD83.1-201ENST00000411362 77 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 MIR18B-201ENST00000454574 71 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 AL133373.1-201ENST00000497098 94 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 AC097510.1-201ENST00000510945 133 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
FOXR1Q6PIV2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 RNA5SP245-201ENST00000364239 121 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 Y_RNA.258-201ENST00000364613 105 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 MIR633-201ENST00000384821 98 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 MIR4529-201ENST00000578110 78 ntBASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXR1Q6PIV2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXR1Q6PIV2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXR1Q6PIV2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
FOXR1Q6PIV2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.17□□□□□ -2.06
FOXR1Q6PIV2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXR1Q6PIV2 RNU6-1216P-201ENST00000362590 107 ntBASIC2.16□□□□□ -2.06
FOXR1Q6PIV2 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
FOXR1Q6PIV2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
FOXR1Q6PIV2 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
FOXR1Q6PIV2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXR1Q6PIV2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
FOXR1Q6PIV2 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
FOXR1Q6PIV2 MIR599-201ENST00000385069 95 ntBASIC2.15□□□□□ -2.07
FOXR1Q6PIV2 MIR4511-201ENST00000582784 87 ntBASIC2.15□□□□□ -2.07
FOXR1Q6PIV2 MIR4773-1-201ENST00000637203 78 ntBASIC2.15□□□□□ -2.07
FOXR1Q6PIV2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
FOXR1Q6PIV2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 RNU6-935P-201ENST00000410371 100 ntBASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 RNA5SP458-201ENST00000516188 119 ntBASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 RNU7-10P-201ENST00000607194 63 ntBASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 MIR8053-201ENST00000613344 75 ntBASIC2.14□□□□□ -2.07
FOXR1Q6PIV2 RNU6-382P-201ENST00000365181 106 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 MIR1257-201ENST00000408490 117 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 AC055731.1-201ENST00000474387 401 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 RNU6-982P-201ENST00000516216 102 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 RNU6-1265P-201ENST00000516342 103 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
FOXR1Q6PIV2 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 AC110620.1-201ENST00000416042 228 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 AC097635.1-201ENST00000450678 155 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
FOXR1Q6PIV2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXR1Q6PIV2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.11□□□□□ -2.07
FOXR1Q6PIV2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 RNU6-1177P-201ENST00000391058 104 ntBASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 SNORA40.6-201ENST00000391153 128 ntBASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 RNU6-141P-201ENST00000410499 105 ntBASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 HMGN2P23-201ENST00000456759 269 ntBASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 AC103706.3-201ENST00000636297 85 ntBASIC2.1□□□□□ -2.07
FOXR1Q6PIV2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 RNU6-287P-201ENST00000516230 98 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 AL645939.4-201ENST00000604495 135 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
FOXR1Q6PIV2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
FOXR1Q6PIV2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
FOXR1Q6PIV2 RNU6-1187P-201ENST00000364771 110 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 RNU6-934P-201ENST00000365154 107 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 AC079150.2-201ENST00000443733 78 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 MIR4771-2-201ENST00000577758 74 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 MIR4771-1-201ENST00000582617 74 ntBASIC2.08□□□□□ -2.08
FOXR1Q6PIV2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 MIR125B2-201ENST00000385128 89 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 RNA5SP212-201ENST00000391223 107 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 RNU6-765P-201ENST00000516916 99 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 RNU6-165P-201ENST00000517170 99 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 AC138907.6-201ENST00000568401 126 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 AC138869.1-201ENST00000568623 124 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 MIR8063-201ENST00000621930 81 ntBASIC2.07□□□□□ -2.08
FOXR1Q6PIV2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
FOXR1Q6PIV2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.06□□□□□ -2.08
FOXR1Q6PIV2 Y_RNA.330-201ENST00000365230 109 ntBASIC2.06□□□□□ -2.08
FOXR1Q6PIV2 RNU6-535P-201ENST00000384722 107 ntBASIC2.06□□□□□ -2.08
FOXR1Q6PIV2 AC244098.3-201ENST00000424803 96 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms