Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SNORD111-201ENST00000408139 94 ntBASIC1.78□□□□□ -2.12
PRPF40BQ6NWY9 AC015818.7-201ENST00000428754 109 ntBASIC1.78□□□□□ -2.12
PRPF40BQ6NWY9 AC087499.7-201ENST00000441958 109 ntBASIC1.78□□□□□ -2.12
PRPF40BQ6NWY9 MIR5588-201ENST00000581890 63 ntBASIC1.78□□□□□ -2.12
PRPF40BQ6NWY9 AC022709.1-201ENST00000615967 87 ntBASIC1.78□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-509P-201ENST00000363519 107 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.426-201ENST00000384068 113 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 MIR6078-201ENST00000611069 100 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 AC106800.4-201ENST00000614905 153 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 MIR3202-2-201ENST00000635980 79 ntBASIC1.77□□□□□ -2.13
PRPF40BQ6NWY9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 RNU7-90P-201ENST00000459216 62 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 RNU7-21P-201ENST00000459430 62 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-633P-201ENST00000362612 103 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 MIR222-201ENST00000384992 110 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 SNORD78.1-201ENST00000390866 65 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-243P-201ENST00000391140 107 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 RNU7-40P-201ENST00000516397 64 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 AC013244.2-201ENST00000603396 103 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 RNU7-10P-201ENST00000607194 63 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 MIR6082-201ENST00000613604 109 ntBASIC1.75□□□□□ -2.13
PRPF40BQ6NWY9 SNORD115-37-201ENST00000363768 82 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-979P-201ENST00000383896 107 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 MIR516A2-201ENST00000384888 90 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 MIR516A1-201ENST00000385033 90 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 MIR125B2-201ENST00000385128 89 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 MIR548BB-201ENST00000626714 66 ntBASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-364P-201ENST00000384387 107 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 MIR519C-201ENST00000385053 87 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 SNORD100-201ENST00000408573 76 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 RPS26P5-201ENST00000418544 335 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.648-201ENST00000459455 110 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 SNORA70.22-201ENST00000517160 124 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 MIR548H5-201ENST00000580314 60 ntBASIC1.73□□□□□ -2.13
PRPF40BQ6NWY9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 RNU6-1124P-201ENST00000384169 107 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 MIR635-201ENST00000384830 98 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 SNORD63B-201ENST00000411005 70 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 SNORD79.1-201ENST00000516069 84 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 RNU7-156P-201ENST00000517214 74 ntBASIC1.72□□□□□ -2.13
PRPF40BQ6NWY9 RNU4-32P-201ENST00000363404 141 ntBASIC1.71□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-466P-201ENST00000391224 103 ntBASIC1.71□□□□□ -2.14
PRPF40BQ6NWY9 AC067940.1-201ENST00000458411 300 ntBASIC1.71□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-765P-201ENST00000516916 99 ntBASIC1.71□□□□□ -2.14
PRPF40BQ6NWY9 MIR4676-201ENST00000583078 72 ntBASIC1.71□□□□□ -2.14
PRPF40BQ6NWY9 SNORD115-27-201ENST00000364430 82 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RNU1-93P-201ENST00000364704 169 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.437-201ENST00000384113 113 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 MIR100-201ENST00000385259 80 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RNU7-171P-201ENST00000459581 62 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-65P-201ENST00000516332 98 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 AC006160.2-201ENST00000637708 154 ntBASIC1.7□□□□□ -2.14
PRPF40BQ6NWY9 MIR938-201ENST00000401216 83 ntBASIC1.69□□□□□ -2.14
PRPF40BQ6NWY9 AC004223.1-201ENST00000479840 271 ntBASIC1.69□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-977P-201ENST00000516411 103 ntBASIC1.69□□□□□ -2.14
PRPF40BQ6NWY9 SNORD4B-201ENST00000459083 72 ntBASIC1.68□□□□□ -2.14
PRPF40BQ6NWY9 snoU13.11-201ENST00000459219 104 ntBASIC1.68□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.685-201ENST00000516532 108 ntBASIC1.68□□□□□ -2.14
PRPF40BQ6NWY9 MIR3660-201ENST00000584845 100 ntBASIC1.68□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-228P-201ENST00000362700 106 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 SNORD36A-201ENST00000362874 73 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 SNORD12-201ENST00000391002 90 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 RNU6-1275P-201ENST00000391087 107 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 MIR1236-201ENST00000408340 102 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 MIR4536-1-201ENST00000583537 88 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 AC027335.2-201ENST00000624030 375 ntBASIC1.67□□□□□ -2.14
PRPF40BQ6NWY9 MIR1-1-201ENST00000362147 71 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 MIR598-201ENST00000384868 97 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 Y_RNA.607-201ENST00000410597 98 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 RNU7-85P-201ENST00000458851 63 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 RNU7-106P-201ENST00000459514 67 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 TRAJ51-201ENST00000504127 63 ntBASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.66□□□□□ -2.14
PRPF40BQ6NWY9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
PRPF40BQ6NWY9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PRPF40BQ6NWY9 SNORD114-27-201ENST00000363766 70 ntBASIC1.65□□□□□ -2.15
PRPF40BQ6NWY9 RNU7-195P-201ENST00000458793 62 ntBASIC1.65□□□□□ -2.15
PRPF40BQ6NWY9 AC093729.1-201ENST00000513074 128 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms