Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-762P-201ENST00000517107 102 ntBASIC1.33□□□□□ -2.2
KRT40Q6A162 Y_RNA.68-201ENST00000362881 102 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 RNU6-403P-201ENST00000363163 104 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 SNORD58A-201ENST00000383875 65 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 RPS26P5-201ENST00000418544 335 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 AC002429.1-201ENST00000437672 148 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 RNU6-850P-201ENST00000516934 103 ntBASIC1.32□□□□□ -2.2
KRT40Q6A162 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRT40Q6A162 Y_RNA.13-201ENST00000362403 112 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 Y_RNA.42-201ENST00000362660 108 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 MIR181B2-201ENST00000385004 89 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 MIR216A-201ENST00000385063 110 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 MIR125B2-201ENST00000385128 89 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 SNORD12-201ENST00000391002 90 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 AC026421.1-201ENST00000519101 163 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 MIR4676-201ENST00000583078 72 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 AC025521.1-201ENST00000621624 286 ntBASIC1.31□□□□□ -2.2
KRT40Q6A162 SNORD73B-201ENST00000364394 72 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRT40Q6A162 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 SNORA72.6-201ENST00000384520 129 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 MIR5000-201ENST00000577717 103 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 AC013244.2-201ENST00000603396 103 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 MIR6082-201ENST00000613604 109 ntBASIC1.3□□□□□ -2.2
KRT40Q6A162 Y_RNA.96-201ENST00000363092 109 ntBASIC1.29□□□□□ -2.2
KRT40Q6A162 RNU6-571P-201ENST00000384128 107 ntBASIC1.29□□□□□ -2.2
KRT40Q6A162 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
KRT40Q6A162 AL513043.2-201ENST00000573941 143 ntBASIC1.29□□□□□ -2.2
KRT40Q6A162 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
KRT40Q6A162 RNU4-58P-201ENST00000363192 141 ntBASIC1.28□□□□□ -2.2
KRT40Q6A162 SNORD116-10-201ENST00000363791 102 ntBASIC1.28□□□□□ -2.2
KRT40Q6A162 Y_RNA.558-201ENST00000384685 113 ntBASIC1.28□□□□□ -2.2
KRT40Q6A162 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KRT40Q6A162 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
KRT40Q6A162 Y_RNA.593-201ENST00000410292 98 ntBASIC1.28□□□□□ -2.2
KRT40Q6A162 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRT40Q6A162 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
KRT40Q6A162 MIR4804-201ENST00000581683 73 ntBASIC1.27□□□□□ -2.21
KRT40Q6A162 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
KRT40Q6A162 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
KRT40Q6A162 AC008608.1-201ENST00000603910 127 ntBASIC1.27□□□□□ -2.21
KRT40Q6A162 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
KRT40Q6A162 MIR373-201ENST00000362273 69 ntBASIC1.26□□□□□ -2.21
KRT40Q6A162 Y_RNA.433-201ENST00000384089 102 ntBASIC1.26□□□□□ -2.21
KRT40Q6A162 SNORD100-201ENST00000408573 76 ntBASIC1.26□□□□□ -2.21
KRT40Q6A162 RNU6-994P-201ENST00000410507 111 ntBASIC1.26□□□□□ -2.21
KRT40Q6A162 RNU6-1194P-201ENST00000516208 104 ntBASIC1.26□□□□□ -2.21
KRT40Q6A162 Y_RNA.17-201ENST00000362433 111 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 Y_RNA.57-201ENST00000362806 113 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 MIR1827-201ENST00000408549 66 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 RNU7-106P-201ENST00000459514 67 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 Y_RNA.681-201ENST00000516445 113 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 RNU6-765P-201ENST00000516916 99 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 AC062037.1-201ENST00000605302 128 ntBASIC1.25□□□□□ -2.21
KRT40Q6A162 RNU6-1125P-201ENST00000363601 107 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU6-1134P-201ENST00000365156 101 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU6-480P-201ENST00000384332 107 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 MIR516A2-201ENST00000384888 90 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 MIR516A1-201ENST00000385033 90 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 MIR938-201ENST00000401216 83 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU7-56P-201ENST00000458744 62 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU7-102P-201ENST00000458948 62 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 TRAJ51-201ENST00000504127 63 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.24□□□□□ -2.21
KRT40Q6A162 RNU6-219P-201ENST00000364728 107 ntBASIC1.23□□□□□ -2.21
KRT40Q6A162 Y_RNA.388-201ENST00000383919 113 ntBASIC1.23□□□□□ -2.21
KRT40Q6A162 RNU6-267P-201ENST00000516714 103 ntBASIC1.23□□□□□ -2.21
KRT40Q6A162 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
KRT40Q6A162 SNORD36A-201ENST00000362874 73 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 RNA5SP457-201ENST00000363657 124 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 RNU6-402P-201ENST00000410678 103 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 RNY4P29-201ENST00000410801 97 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 SNORD63B-201ENST00000411005 70 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 RNU6-977P-201ENST00000516411 103 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 RNU6-448P-201ENST00000517052 107 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.22□□□□□ -2.21
KRT40Q6A162 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
KRT40Q6A162 RNU6-675P-201ENST00000384236 104 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 Y_RNA.536-201ENST00000384621 113 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 RNU6-291P-201ENST00000384720 107 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 MIR1302-4-201ENST00000408701 150 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 MIR4668-201ENST00000582284 70 ntBASIC1.21□□□□□ -2.22
KRT40Q6A162 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
KRT40Q6A162 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 MIR101-2-201ENST00000362195 79 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 RNA5SP245-201ENST00000364239 121 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 RNU6-497P-201ENST00000365316 104 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 RNU6-364P-201ENST00000384387 107 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 MIR193B-201ENST00000384907 83 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 Y_RNA.609-201ENST00000410669 89 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 Y_RNA.620-201ENST00000411009 88 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 AC092628.1-201ENST00000436250 252 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms