Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6-1296P-201ENST00000383879 107 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNU6-480P-201ENST00000384332 107 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 MIR519C-201ENST00000385053 87 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 MIR548G-201ENST00000408442 89 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNA5SP225-201ENST00000410874 135 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SNORA44.1-201ENST00000517031 108 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A4P53420 SEPT14P17-201ENST00000617978 177 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNU6-1123P-201ENST00000362347 106 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SNORD36A-201ENST00000362874 73 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 Y_RNA.98-201ENST00000363109 102 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SNORD115-27-201ENST00000364430 82 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNY1P2-201ENST00000364820 117 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SNORD1A-201ENST00000364968 72 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 Y_RNA.426-201ENST00000384068 113 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 MIR1302-7-201ENST00000408841 72 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNU4-83P-201ENST00000410863 133 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SPINT5P-201ENST00000448174 155 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 AL133373.1-201ENST00000497098 94 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 RNU7-41P-201ENST00000515917 61 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A4P53420 AC103810.7-201ENST00000607821 91 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 AC008163.1-202ENST00000636004 2889 ntBASIC0.81□□□□□ -2.28
COL4A4P53420 SNORA32-201ENST00000384072 121 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 RNU6-242P-201ENST00000384359 107 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 SNORD38.2-201ENST00000384470 69 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 MT-TN-201ENST00000387400 73 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 RNA5SP25-201ENST00000410815 110 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 AL161935.2-201ENST00000414627 60 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 AC138749.4-201ENST00000563970 127 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 MIR4491-201ENST00000581087 68 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 GHRLOS.1-201ENST00000610995 70 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 U7.4-201ENST00000614961 63 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 AL662814.1-201ENST00000617364 121 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 MIR548BB-201ENST00000626714 66 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 MIR4251-201ENST00000635819 61 ntBASIC0.8□□□□□ -2.28
COL4A4P53420 Y_RNA.168-201ENST00000363740 102 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 RNU6-776P-201ENST00000364403 104 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 RNU6-1022P-201ENST00000365049 104 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 Y_RNA.448-201ENST00000384185 108 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 SNORA2B-201ENST00000384583 137 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 MIR34C-201ENST00000384831 77 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 RNA5SP237-201ENST00000410414 113 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 Y_RNA.609-201ENST00000410669 89 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.79□□□□□ -2.28
COL4A4P53420 SNORD4B-201ENST00000459083 72 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 AC008834.1-201ENST00000511612 175 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 RNU6-322P-201ENST00000516010 103 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 RNU6-65P-201ENST00000516332 98 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 AC140658.3-201ENST00000567603 271 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A4P53420 AC020891.4-201ENST00000605745 93 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 MIR8066-201ENST00000617280 78 ntBASIC0.79□□□□□ -2.28
COL4A4P53420 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
COL4A4P53420 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 Y_RNA.173-201ENST00000363776 113 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 RNU6-580P-201ENST00000365159 107 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 MIR1236-201ENST00000408340 102 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 RNU6-402P-201ENST00000410678 103 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 AC139453.2-201ENST00000487255 133 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 MIR3198-2-201ENST00000577868 80 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 MIR4264-201ENST00000583520 66 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 MIR4536-1-201ENST00000583537 88 ntBASIC0.78□□□□□ -2.28
COL4A4P53420 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.78□□□□□ -2.28
COL4A4P53420 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL4A4P53420 Y_RNA.94-201ENST00000363068 106 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 SNORD115-37-201ENST00000363768 82 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU6-865P-201ENST00000364772 107 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU6-939P-201ENST00000384634 107 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 MIR563-201ENST00000385080 79 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU6-1054P-201ENST00000411293 104 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 AC093729.1-201ENST00000513074 128 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU6-947P-201ENST00000516264 106 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 RNU7-137P-201ENST00000516788 62 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 AL357312.1-201ENST00000603879 298 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 MIR8074-201ENST00000615081 81 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 AP001362.1-201ENST00000625165 124 ntBASIC0.78□□□□□ -2.29
COL4A4P53420 SNORA25.3-201ENST00000363205 127 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 RNU6-24P-201ENST00000384440 107 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL4A4P53420 RNU6-1307P-201ENST00000391012 103 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 SNORA25.13-201ENST00000516395 103 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 AP003716.2-201ENST00000528260 108 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 AC141846.1-201ENST00000568348 142 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 SNORA77B-201ENST00000578179 125 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.77□□□□□ -2.29
COL4A4P53420 Y_RNA.57-201ENST00000362806 113 ntBASIC0.76□□□□□ -2.29
COL4A4P53420 MIR635-201ENST00000384830 98 ntBASIC0.76□□□□□ -2.29
COL4A4P53420 MIR516A2-201ENST00000384888 90 ntBASIC0.76□□□□□ -2.29
COL4A4P53420 MIR516A1-201ENST00000385033 90 ntBASIC0.76□□□□□ -2.29
COL4A4P53420 MIR1185-1-201ENST00000408598 86 ntBASIC0.76□□□□□ -2.29
COL4A4P53420 AC027119.1-201ENST00000440877 241 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms