Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-170P-201ENST00000362832 104 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC008267.6-201ENST00000441664 139 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AC097635.1-201ENST00000450678 155 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 RNA5SP436-201ENST00000516020 115 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 SNORD33.1-201ENST00000516213 88 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 AL670379.3-201ENST00000605040 251 ntBASIC0.41□□□□□ -2.34
APOBEC1P41238 RNU6-1099P-201ENST00000363533 107 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 SNORD38.1-201ENST00000363863 68 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 MIR548A1-201ENST00000385041 97 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 AL603908.1-201ENST00000406098 201 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
APOBEC1P41238 SNRPGP12-201ENST00000449481 213 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 RNU6-850P-201ENST00000516934 103 ntBASIC0.4□□□□□ -2.35
APOBEC1P41238 Y_RNA.342-201ENST00000365352 113 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 MIR599-201ENST00000385069 95 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 MIR519A1-201ENST00000385257 85 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 SNORD63B-201ENST00000411005 70 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 SPINT5P-201ENST00000448174 155 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 RNU6-90P-201ENST00000606352 106 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
APOBEC1P41238 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
APOBEC1P41238 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
APOBEC1P41238 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 Y_RNA.466-201ENST00000384294 113 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RNU6-1006P-201ENST00000516998 103 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 AL035470.1-201ENST00000622571 220 ntBASIC0.38□□□□□ -2.35
APOBEC1P41238 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.38□□□□□ -2.35
APOBEC1P41238 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNU6-1201P-201ENST00000384227 107 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 Y_RNA.563-201ENST00000384707 108 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNU2-59P-201ENST00000410482 191 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AL353813.1-201ENST00000440700 253 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 Y_RNA.809-201ENST00000516058 95 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 RNA5SP480-201ENST00000516840 109 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AC096720.1-201ENST00000604441 183 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 MIR7107-201ENST00000611489 80 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 AL442128.1-201ENST00000615151 90 ntBASIC0.37□□□□□ -2.35
APOBEC1P41238 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 Y_RNA.353-201ENST00000365440 108 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 RNU6-1117P-201ENST00000384525 104 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 MIR548G-201ENST00000408442 89 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 AC068339.1-201ENST00000526965 141 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 MIR3910-1-201ENST00000580936 111 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 AC132825.6-201ENST00000638861 357 ntBASIC0.36□□□□□ -2.35
APOBEC1P41238 Y_RNA.35-201ENST00000362601 101 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNA5SP403-201ENST00000363598 108 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 Y_RNA.221-201ENST00000364248 96 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU7-104P-201ENST00000459398 79 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU6-62P-201ENST00000516526 102 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU7-161P-201ENST00000517289 62 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
APOBEC1P41238 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.261-201ENST00000364631 102 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 Y_RNA.377-201ENST00000365644 108 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.34□□□□□ -2.36
APOBEC1P41238 MIR4694-201ENST00000578534 80 ntBASIC0.34□□□□□ -2.36
APOBEC1P41238 SNORD114-26-201ENST00000363543 72 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 SNORD116-21-201ENST00000384507 92 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-880P-201ENST00000384526 107 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU7-106P-201ENST00000459514 67 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 RNU6-412P-201ENST00000516434 106 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 MIR5009-201ENST00000578736 100 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 AL365222.1-201ENST00000614661 98 ntBASIC0.33□□□□□ -2.36
APOBEC1P41238 Y_RNA.57-201ENST00000362806 113 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 U8.6-201ENST00000364939 135 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR516A2-201ENST00000384888 90 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR193B-201ENST00000384907 83 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR516A1-201ENST00000385033 90 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 RNU6-1254P-201ENST00000391266 104 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 AC010487.4-201ENST00000637027 61 ntBASIC0.32□□□□□ -2.36
APOBEC1P41238 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 Y_RNA.173-201ENST00000363776 113 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 Y_RNA.281-201ENST00000364774 94 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-22P-201ENST00000384355 107 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-1168P-201ENST00000390831 104 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.31□□□□□ -2.36
APOBEC1P41238 RNY3P2-201ENST00000362918 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms