Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR4796-201ENST00000580742 81 ntBASIC2.06□□□□□ -2.08
RXRBP28702 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
RXRBP28702 RNU6-132P-201ENST00000383863 107 ntBASIC2.05□□□□□ -2.08
RXRBP28702 Y_RNA.532-201ENST00000384590 113 ntBASIC2.05□□□□□ -2.08
RXRBP28702 MT-TN-201ENST00000387400 73 ntBASIC2.05□□□□□ -2.08
RXRBP28702 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
RXRBP28702 MIR1185-1-201ENST00000408598 86 ntBASIC2.05□□□□□ -2.08
RXRBP28702 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RXRBP28702 SCARNA18B-201ENST00000458806 135 ntBASIC2.05□□□□□ -2.08
RXRBP28702 MIR6516-201ENST00000630554 81 ntBASIC2.05□□□□□ -2.08
RXRBP28702 SNORD114-27-201ENST00000363766 70 ntBASIC2.04□□□□□ -2.08
RXRBP28702 MIR520H-201ENST00000385126 88 ntBASIC2.04□□□□□ -2.08
RXRBP28702 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RXRBP28702 HSPE1P24-201ENST00000450782 238 ntBASIC2.04□□□□□ -2.08
RXRBP28702 RNU7-106P-201ENST00000459514 67 ntBASIC2.04□□□□□ -2.08
RXRBP28702 AC023790.1-201ENST00000482174 347 ntBASIC2.04□□□□□ -2.08
RXRBP28702 RNU6-1094P-201ENST00000362416 104 ntBASIC2.03□□□□□ -2.08
RXRBP28702 Y_RNA.545-201ENST00000384652 105 ntBASIC2.03□□□□□ -2.08
RXRBP28702 Y_RNA.588-201ENST00000391254 102 ntBASIC2.03□□□□□ -2.08
RXRBP28702 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
RXRBP28702 RNU7-62P-201ENST00000458856 62 ntBASIC2.03□□□□□ -2.08
RXRBP28702 RPL30P7-201ENST00000479312 323 ntBASIC2.03□□□□□ -2.08
RXRBP28702 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
RXRBP28702 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
RXRBP28702 GHRLOS.1-201ENST00000610995 70 ntBASIC2.03□□□□□ -2.08
RXRBP28702 SNORA72.6-201ENST00000384520 129 ntBASIC2.02□□□□□ -2.09
RXRBP28702 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RXRBP28702 Y_RNA.681-201ENST00000516445 113 ntBASIC2.02□□□□□ -2.09
RXRBP28702 MIR3134-201ENST00000579433 74 ntBASIC2.02□□□□□ -2.09
RXRBP28702 MIR4491-201ENST00000581087 68 ntBASIC2.02□□□□□ -2.09
RXRBP28702 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
RXRBP28702 AL357312.1-201ENST00000603879 298 ntBASIC2.02□□□□□ -2.09
RXRBP28702 MIR8074-201ENST00000615081 81 ntBASIC2.02□□□□□ -2.09
RXRBP28702 RNU6-161P-201ENST00000363051 106 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-654P-201ENST00000364373 107 ntBASIC2.01□□□□□ -2.09
RXRBP28702 Y_RNA.283-201ENST00000364798 112 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-686P-201ENST00000364839 107 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-580P-201ENST00000365159 107 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-811P-201ENST00000384069 107 ntBASIC2.01□□□□□ -2.09
RXRBP28702 MT-TF-201ENST00000387314 71 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-1254P-201ENST00000391266 104 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.01□□□□□ -2.09
RXRBP28702 SNORA18.5-201ENST00000516616 101 ntBASIC2.01□□□□□ -2.09
RXRBP28702 RNU6-531P-201ENST00000516694 104 ntBASIC2.01□□□□□ -2.09
RXRBP28702 SNORA25.16-201ENST00000516741 121 ntBASIC2.01□□□□□ -2.09
RXRBP28702 MIR3064-201ENST00000581130 66 ntBASIC2.01□□□□□ -2.09
RXRBP28702 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RXRBP28702 MIR377-201ENST00000362145 69 ntBASIC2□□□□□ -2.09
RXRBP28702 MIR2115-201ENST00000516657 100 ntBASIC2□□□□□ -2.09
RXRBP28702 SNORD90-201ENST00000391145 111 ntBASIC1.99□□□□□ -2.09
RXRBP28702 RNA5SP95-201ENST00000410319 137 ntBASIC1.99□□□□□ -2.09
RXRBP28702 AL133373.1-201ENST00000497098 94 ntBASIC1.99□□□□□ -2.09
RXRBP28702 RNU6-1108P-201ENST00000516308 104 ntBASIC1.99□□□□□ -2.09
RXRBP28702 MIR4536-1-201ENST00000583537 88 ntBASIC1.99□□□□□ -2.09
RXRBP28702 AC104996.3-201ENST00000590718 94 ntBASIC1.99□□□□□ -2.09
RXRBP28702 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
RXRBP28702 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.98□□□□□ -2.09
RXRBP28702 AC114801.3-201ENST00000510231 177 ntBASIC1.98□□□□□ -2.09
RXRBP28702 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
RXRBP28702 MIR302D-201ENST00000362275 68 ntBASIC1.97□□□□□ -2.09
RXRBP28702 SNORD33-201ENST00000362761 85 ntBASIC1.97□□□□□ -2.09
RXRBP28702 RNU6-957P-201ENST00000363652 99 ntBASIC1.97□□□□□ -2.09
RXRBP28702 MIR216A-201ENST00000385063 110 ntBASIC1.97□□□□□ -2.09
RXRBP28702 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RXRBP28702 RNU6-243P-201ENST00000391140 107 ntBASIC1.97□□□□□ -2.09
RXRBP28702 SNORD63B-201ENST00000411005 70 ntBASIC1.97□□□□□ -2.09
RXRBP28702 FGF7P7-201ENST00000514120 227 ntBASIC1.97□□□□□ -2.09
RXRBP28702 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RXRBP28702 AL161722.3-201ENST00000605789 2983 ntBASIC1.96□□□□□ -2.1
RXRBP28702 RNA5SP264-201ENST00000363115 107 ntBASIC1.96□□□□□ -2.1
RXRBP28702 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
RXRBP28702 RNU6-947P-201ENST00000516264 106 ntBASIC1.96□□□□□ -2.1
RXRBP28702 RNU11-2P-201ENST00000516898 142 ntBASIC1.96□□□□□ -2.1
RXRBP28702 MIRLET7F1-201ENST00000362202 87 ntBASIC1.95□□□□□ -2.1
RXRBP28702 RNA5SP457-201ENST00000363657 124 ntBASIC1.95□□□□□ -2.1
RXRBP28702 RNA5SP363-201ENST00000365072 115 ntBASIC1.95□□□□□ -2.1
RXRBP28702 RNU1-36P-201ENST00000365130 165 ntBASIC1.95□□□□□ -2.1
RXRBP28702 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
RXRBP28702 Y_RNA.660-201ENST00000516002 120 ntBASIC1.95□□□□□ -2.1
RXRBP28702 RNU6-1194P-201ENST00000516208 104 ntBASIC1.95□□□□□ -2.1
RXRBP28702 MIR6767-201ENST00000637302 66 ntBASIC1.95□□□□□ -2.1
RXRBP28702 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RXRBP28702 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.95□□□□□ -2.1
RXRBP28702 Y_RNA.491-201ENST00000384417 107 ntBASIC1.94□□□□□ -2.1
RXRBP28702 MIR635-201ENST00000384830 98 ntBASIC1.94□□□□□ -2.1
RXRBP28702 snoU13.21-201ENST00000459368 105 ntBASIC1.94□□□□□ -2.1
RXRBP28702 TRAJ51-201ENST00000504127 63 ntBASIC1.94□□□□□ -2.1
RXRBP28702 SNORD92-201ENST00000585078 85 ntBASIC1.94□□□□□ -2.1
RXRBP28702 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.94□□□□□ -2.1
RXRBP28702 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RXRBP28702 MIR103A2-201ENST00000362154 78 ntBASIC1.93□□□□□ -2.1
RXRBP28702 RNU4-58P-201ENST00000363192 141 ntBASIC1.93□□□□□ -2.1
RXRBP28702 SNORD100-201ENST00000408573 76 ntBASIC1.93□□□□□ -2.1
RXRBP28702 MIR18B-201ENST00000454574 71 ntBASIC1.93□□□□□ -2.1
RXRBP28702 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RXRBP28702 SNORD93-201ENST00000408813 74 ntBASIC1.92□□□□□ -2.1
RXRBP28702 AL606490.4-201ENST00000423117 127 ntBASIC1.92□□□□□ -2.1
RXRBP28702 RNU6-1015P-201ENST00000517121 99 ntBASIC1.92□□□□□ -2.1
RXRBP28702 RNU6-165P-201ENST00000517170 99 ntBASIC1.92□□□□□ -2.1
RXRBP28702 MIR519A1-201ENST00000385257 85 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms