Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-109P-201ENST00000516364 107 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-184P-201ENST00000516514 107 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 AL353765.1-201ENST00000605514 183 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-86P-201ENST00000606534 107 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-755P-201ENST00000364400 103 ntBASIC1.27□□□□□ -2.21
ERCC3P19447 Y_RNA.57-201ENST00000362806 113 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 Y_RNA.78-201ENST00000362970 110 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 SNORA31.14-201ENST00000516728 116 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 AC091304.10-201ENST00000641554 121 ntBASIC1.26□□□□□ -2.21
ERCC3P19447 Y_RNA.174-201ENST00000363781 105 ntBASIC1.25□□□□□ -2.21
ERCC3P19447 SNORA36.2-201ENST00000384004 127 ntBASIC1.25□□□□□ -2.21
ERCC3P19447 AC244098.3-201ENST00000424803 96 ntBASIC1.25□□□□□ -2.21
ERCC3P19447 SNRPGP12-201ENST00000449481 213 ntBASIC1.25□□□□□ -2.21
ERCC3P19447 Y_RNA.32-201ENST00000362589 110 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 RNU6-170P-201ENST00000362832 104 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 Y_RNA.342-201ENST00000365352 113 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 Y_RNA.540-201ENST00000384638 111 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 MIR608-201ENST00000384820 100 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 MIR644A-201ENST00000385262 94 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 MIR548J-201ENST00000408833 112 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 AC092628.1-201ENST00000436250 252 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 AC138907.6-201ENST00000568401 126 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 AC138869.1-201ENST00000568623 124 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 MIR151B-201ENST00000584249 96 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 AC012531.4-201ENST00000616509 177 ntBASIC1.24□□□□□ -2.21
ERCC3P19447 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
ERCC3P19447 Y_RNA.95-201ENST00000363079 95 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 RNA5SP245-201ENST00000364239 121 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 RNU6-1163P-201ENST00000364516 107 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 RNU6-147P-201ENST00000383983 107 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 SNORD63B-201ENST00000411005 70 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 TRAJ51-201ENST00000504127 63 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
ERCC3P19447 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ERCC3P19447 Y_RNA.467-201ENST00000384297 102 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 Y_RNA.544-201ENST00000384650 113 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 MIR516A2-201ENST00000384888 90 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 MIR516A1-201ENST00000385033 90 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 MIR548Z-201ENST00000584743 97 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
ERCC3P19447 Y_RNA.107-201ENST00000363190 121 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 RNU6-1125P-201ENST00000363601 107 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 RNU6-480P-201ENST00000384332 107 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.21□□□□□ -2.22
ERCC3P19447 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 uc_338.16-201ENST00000621804 95 ntBASIC1.21□□□□□ -2.22
ERCC3P19447 Y_RNA.173-201ENST00000363776 113 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 RNU6-32P-201ENST00000383948 107 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 RNU6-13P-201ENST00000384248 107 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 RNU6-12P-201ENST00000384604 107 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 RNU6-41P-201ENST00000384741 107 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 RNU7-195P-201ENST00000458793 62 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 PSMC1P5-201ENST00000512850 177 ntBASIC1.2□□□□□ -2.22
ERCC3P19447 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ERCC3P19447 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
ERCC3P19447 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
ERCC3P19447 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
ERCC3P19447 Y_RNA.818-201ENST00000618813 71 ntBASIC1.19□□□□□ -2.22
ERCC3P19447 MIR18A-201ENST00000362310 71 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 MIR181B2-201ENST00000385004 89 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 Y_RNA.809-201ENST00000516058 95 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 RNU6-537P-201ENST00000517277 103 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 MIR3678-201ENST00000578455 94 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 MIR4439-201ENST00000583746 80 ntBASIC1.18□□□□□ -2.22
ERCC3P19447 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ERCC3P19447 RNU6-1229P-201ENST00000364295 107 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 RNU6-153P-201ENST00000364422 104 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 Y_RNA.495-201ENST00000384435 112 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 MIR7-2-201ENST00000384970 110 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 MIR599-201ENST00000385069 95 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 RNU6-243P-201ENST00000391140 107 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 RNU7-106P-201ENST00000459514 67 ntBASIC1.17□□□□□ -2.22
ERCC3P19447 RNU6-813P-201ENST00000384691 107 ntBASIC1.16□□□□□ -2.22
ERCC3P19447 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.16□□□□□ -2.22
ERCC3P19447 MIR4777-201ENST00000583710 86 ntBASIC1.16□□□□□ -2.22
ERCC3P19447 AC103810.7-201ENST00000607821 91 ntBASIC1.16□□□□□ -2.22
ERCC3P19447 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.16□□□□□ -2.22
ERCC3P19447 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
ERCC3P19447 Y_RNA.221-201ENST00000364248 96 ntBASIC1.15□□□□□ -2.23
ERCC3P19447 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
ERCC3P19447 RNU6-1254P-201ENST00000391266 104 ntBASIC1.15□□□□□ -2.23
ERCC3P19447 RNU7-61P-201ENST00000515897 61 ntBASIC1.15□□□□□ -2.23
ERCC3P19447 RNA5SP480-201ENST00000516840 109 ntBASIC1.15□□□□□ -2.23
ERCC3P19447 Y_RNA.93-201ENST00000363066 109 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 SNORD115-24-201ENST00000363528 82 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 RNU6-1244P-201ENST00000363614 108 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 RNU6-644P-201ENST00000391155 98 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 Y_RNA.705-201ENST00000516862 110 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
ERCC3P19447 Y_RNA.96-201ENST00000363092 109 ntBASIC1.13□□□□□ -2.23
ERCC3P19447 SNORA40.13-201ENST00000516379 120 ntBASIC1.13□□□□□ -2.23
ERCC3P19447 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
ERCC3P19447 SNORD114-26-201ENST00000363543 72 ntBASIC1.12□□□□□ -2.23
ERCC3P19447 RNU6-1187P-201ENST00000364771 110 ntBASIC1.12□□□□□ -2.23
ERCC3P19447 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
ERCC3P19447 AC097635.1-201ENST00000450678 155 ntBASIC1.12□□□□□ -2.23
ERCC3P19447 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms