Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR1285-2-201ENST00000408311 88 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.95□□□□□ -2.72
CXCL1P09341 YWHAEP3-201ENST00000582767 121 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.96□□□□□ -2.72
CXCL1P09341 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.96□□□□□ -2.72
CXCL1P09341 RNU6-240P-201ENST00000516098 97 ntBASIC-1.96□□□□□ -2.72
CXCL1P09341 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 SNORA63.6-201ENST00000364921 119 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 SNORD116-6-201ENST00000384711 96 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 RNY4P36-201ENST00000391116 96 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 MIR1277-201ENST00000408536 78 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 MIR5591-201ENST00000578248 65 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.97□□□□□ -2.72
CXCL1P09341 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 MIR601-201ENST00000385256 79 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 MIR1302-11-201ENST00000408051 138 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 MIR1302-9-201ENST00000408365 138 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 MIR1302-10-201ENST00000408734 138 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 AL121914.1-201ENST00000450188 156 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.98□□□□□ -2.73
CXCL1P09341 SNORD2.1-201ENST00000458762 69 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 SNORD42B-201ENST00000458893 67 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 MIR1302-2-201ENST00000607096 138 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 AC092794.1-201ENST00000612734 582 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 AC090574.1-201ENST00000623186 233 ntBASIC-1.98□□□□□ -2.73
CXCL1P09341 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.99□□□□□ -2.73
CXCL1P09341 RNU6-466P-201ENST00000391224 103 ntBASIC-1.99□□□□□ -2.73
CXCL1P09341 MTND3P22-201ENST00000510932 243 ntBASIC-1.99□□□□□ -2.73
CXCL1P09341 RNU6-208P-201ENST00000362431 107 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNU6-1125P-201ENST00000363601 107 ntBASIC-2□□□□□ -2.73
CXCL1P09341 Y_RNA.173-201ENST00000363776 113 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNA5SP331-201ENST00000364986 107 ntBASIC-2□□□□□ -2.73
CXCL1P09341 SNORD116-29-201ENST00000384516 83 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNU6-576P-201ENST00000390854 102 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNU6-1246P-201ENST00000391064 107 ntBASIC-2□□□□□ -2.73
CXCL1P09341 Y_RNA.661-201ENST00000516003 99 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNU6-1006P-201ENST00000516998 103 ntBASIC-2□□□□□ -2.73
CXCL1P09341 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2□□□□□ -2.73
CXCL1P09341 MIR1246-201ENST00000636535 73 ntBASIC-2□□□□□ -2.73
CXCL1P09341 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 RNU6-121P-201ENST00000410525 99 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.01□□□□□ -2.73
CXCL1P09341 RNU7-152P-201ENST00000458982 64 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 MIR4770-201ENST00000579149 58 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 MIR4464-201ENST00000580818 92 ntBASIC-2.01□□□□□ -2.73
CXCL1P09341 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 RNU4-17P-201ENST00000365598 141 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 MIR451A-201ENST00000385059 72 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 AC084782.3-201ENST00000612282 578 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 MIR6818-201ENST00000621576 65 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 MTND4LP32-201ENST00000636111 270 ntBASIC-2.02□□□□□ -2.73
CXCL1P09341 MIR527-201ENST00000385244 85 ntBASIC-2.03□□□□□ -2.73
CXCL1P09341 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.03□□□□□ -2.73
CXCL1P09341 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.03□□□□□ -2.73
CXCL1P09341 MIR4744-201ENST00000581563 82 ntBASIC-2.03□□□□□ -2.73
CXCL1P09341 MIR365A-201ENST00000362260 87 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 MTATP6P21-201ENST00000440681 189 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 RNU6-976P-201ENST00000516086 111 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 MIR4441-201ENST00000582623 100 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 AL353803.5-201ENST00000599815 141 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.04□□□□□ -2.74
CXCL1P09341 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 RNU6-226P-201ENST00000363778 107 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 SNORD116-1-201ENST00000384335 95 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 RNU6-521P-201ENST00000516663 105 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.05□□□□□ -2.74
CXCL1P09341 AL365265.1-201ENST00000621045 234 ntBASIC-2.05□□□□□ -2.74
CXCL1P09341 SNORD115-33-201ENST00000363723 82 ntBASIC-2.06□□□□□ -2.74
CXCL1P09341 RNU6-647P-201ENST00000364243 107 ntBASIC-2.06□□□□□ -2.74
CXCL1P09341 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.06□□□□□ -2.74
CXCL1P09341 AC107027.2-201ENST00000512197 115 ntBASIC-2.06□□□□□ -2.74
CXCL1P09341 MIR4308-201ENST00000580634 81 ntBASIC-2.06□□□□□ -2.74
CXCL1P09341 AL445584.3-201ENST00000617173 78 ntBASIC-2.06□□□□□ -2.74
CXCL1P09341 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.07□□□□□ -2.74
CXCL1P09341 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.07□□□□□ -2.74
CXCL1P09341 RNU6-643P-201ENST00000384018 107 ntBASIC-2.07□□□□□ -2.74
CXCL1P09341 AC069439.1-201ENST00000494739 167 ntBASIC-2.07□□□□□ -2.74
CXCL1P09341 AC021146.9-201ENST00000512503 156 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms