Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU7-48P-201ENST00000458875 63 ntBASIC0.07□□□□□ -2.4
ATG4BQ9Y4P1 RNU7-120P-201ENST00000459334 63 ntBASIC0.07□□□□□ -2.4
ATG4BQ9Y4P1 RNU7-104P-201ENST00000459398 79 ntBASIC0.07□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.681-201ENST00000516445 113 ntBASIC0.07□□□□□ -2.4
ATG4BQ9Y4P1 AC108081.1-201ENST00000604358 221 ntBASIC0.07□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.272-201ENST00000364696 102 ntBASIC0.06□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-682P-201ENST00000363843 106 ntBASIC0.05□□□□□ -2.4
ATG4BQ9Y4P1 AC244505.6-201ENST00000452829 130 ntBASIC0.05□□□□□ -2.4
ATG4BQ9Y4P1 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
ATG4BQ9Y4P1 RNU7-10P-201ENST00000607194 63 ntBASIC0.05□□□□□ -2.4
ATG4BQ9Y4P1 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.29-201ENST00000362570 113 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-151P-201ENST00000364158 107 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 MIR635-201ENST00000384830 98 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 AL078595.1-201ENST00000404458 226 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 BX276092.1-201ENST00000427368 251 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 AC108059.2-201ENST00000434626 151 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 AC074198.2-201ENST00000508153 258 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNU7-2P-201ENST00000516096 62 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 RNU7-161P-201ENST00000517289 62 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
ATG4BQ9Y4P1 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-726P-201ENST00000364680 107 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-865P-201ENST00000364772 107 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 Y_RNA.441-201ENST00000384123 112 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-616P-201ENST00000384353 107 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-127P-201ENST00000390897 107 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 RNU6-460P-201ENST00000391158 108 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 SNORA81.3-201ENST00000517283 198 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 MIR499B-201ENST00000636498 73 ntBASIC0.03□□□□□ -2.4
ATG4BQ9Y4P1 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
ATG4BQ9Y4P1 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
ATG4BQ9Y4P1 RPL39P34-201ENST00000477141 156 ntBASIC0.02□□□□□ -2.41
ATG4BQ9Y4P1 TRAJ51-201ENST00000504127 63 ntBASIC0.02□□□□□ -2.41
ATG4BQ9Y4P1 AP001362.1-201ENST00000625165 124 ntBASIC0.02□□□□□ -2.41
ATG4BQ9Y4P1 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-915P-201ENST00000364943 103 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 MIR599-201ENST00000385069 95 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 MT-TG-201ENST00000387429 68 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 RNA5SP285-201ENST00000516619 119 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 RNU7-6P-201ENST00000516845 62 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 AC004792.1-201ENST00000614523 137 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 AC067863.3-201ENST00000624172 122 ntBASIC0.01□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.328-201ENST00000365208 113 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-1130P-201ENST00000365434 107 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-449P-201ENST00000383914 107 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 SNORD116-18-201ENST00000383961 92 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 MIR513C-201ENST00000401352 84 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 MIR4743-201ENST00000584576 69 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.778-201ENST00000620203 90 ntBASIC0□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 MIR329-2-201ENST00000385029 84 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 MIR610-201ENST00000385139 96 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 AC141557.1-201ENST00000540982 400 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 MIR376B-201ENST00000614515 100 ntBASIC-0.01□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 AC097635.1-201ENST00000450678 155 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 RNU7-197P-201ENST00000458836 62 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 MIR3121-201ENST00000579680 77 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 AC021753.1-201ENST00000635724 168 ntBASIC-0.02□□□□□ -2.41
ATG4BQ9Y4P1 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
ATG4BQ9Y4P1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.03□□□□□ -2.41
ATG4BQ9Y4P1 MIR593-201ENST00000384856 100 ntBASIC-0.03□□□□□ -2.41
ATG4BQ9Y4P1 AL162376.1-201ENST00000624117 175 ntBASIC-0.03□□□□□ -2.41
ATG4BQ9Y4P1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 MIR548I2-201ENST00000408348 149 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 SNORD63B-201ENST00000411005 70 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 RNU7-195P-201ENST00000458793 62 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 RNU6V-201ENST00000384105 107 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.05□□□□□ -2.42
ATG4BQ9Y4P1 AP001328.1-201ENST00000528550 176 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms