Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 RNU7-90P-201ENST00000459216 62 ntBASIC1.48□□□□□ -2.17
SRPK3Q9UPE1 snoU13.21-201ENST00000459368 105 ntBASIC1.48□□□□□ -2.17
SRPK3Q9UPE1 MIR4421-201ENST00000578133 69 ntBASIC1.48□□□□□ -2.17
SRPK3Q9UPE1 AC106800.4-201ENST00000614905 153 ntBASIC1.48□□□□□ -2.17
SRPK3Q9UPE1 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
SRPK3Q9UPE1 RNU6-170P-201ENST00000362832 104 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 SNORD111-201ENST00000408139 94 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 MIR1257-201ENST00000408490 117 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 SNORD93-201ENST00000408813 74 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 SNORD83.1-201ENST00000411362 77 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 RNU6-795P-201ENST00000516323 103 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 AC138749.4-201ENST00000563970 127 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 AL590095.2-201ENST00000604136 117 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 AL109933.3-201ENST00000619095 188 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
SRPK3Q9UPE1 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 AC004941.2-201ENST00000427009 228 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 MTATP8P2-201ENST00000435212 202 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 AC012531.4-201ENST00000616509 177 ntBASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SRPK3Q9UPE1 AC008163.1-202ENST00000636004 2889 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 ZNF209P-201ENST00000593450 2304 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 Y_RNA.95-201ENST00000363079 95 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 RNU1-36P-201ENST00000365130 165 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 RNU6-934P-201ENST00000365154 107 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 RNY4P30-201ENST00000410216 95 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 RNU6-994P-201ENST00000410507 111 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 AC096949.1-201ENST00000412047 152 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 RNU7-185P-201ENST00000459215 60 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 MIR4771-2-201ENST00000577758 74 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 MIR4771-1-201ENST00000582617 74 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 AC091304.10-201ENST00000641554 121 ntBASIC1.45□□□□□ -2.18
SRPK3Q9UPE1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 SNORD12-201ENST00000391002 90 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 MIR548G-201ENST00000408442 89 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 SPINT5P-201ENST00000448174 155 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 RNA5SP121-201ENST00000516537 101 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 MTND5P40-201ENST00000559945 246 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 AC090897.1-201ENST00000580909 226 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 MIR4439-201ENST00000583746 80 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.44□□□□□ -2.18
SRPK3Q9UPE1 RNU6-403P-201ENST00000363163 104 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 SNORA72.6-201ENST00000384520 129 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 RNU1-98P-201ENST00000458992 160 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 MIR4491-201ENST00000581087 68 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 MIR548Z-201ENST00000584743 97 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 RNU6-90P-201ENST00000606352 106 ntBASIC1.43□□□□□ -2.18
SRPK3Q9UPE1 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 AC109327.2-201ENST00000448339 378 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 RNU7-61P-201ENST00000515897 61 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 RNU7-40P-201ENST00000516397 64 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 RNA5SP330-201ENST00000517096 96 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 MIR4500-201ENST00000579472 76 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 MIR4777-201ENST00000583710 86 ntBASIC1.42□□□□□ -2.18
SRPK3Q9UPE1 HSBP1P2-201ENST00000299671 229 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 Y_RNA.43-201ENST00000362670 111 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 RNU4-83P-201ENST00000410863 133 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 AC015818.7-201ENST00000428754 109 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 AC087499.7-201ENST00000441958 109 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.41□□□□□ -2.18
SRPK3Q9UPE1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SRPK3Q9UPE1 RNU6-1163P-201ENST00000364516 107 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 Y_RNA.467-201ENST00000384297 102 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 RNU6-644P-201ENST00000391155 98 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 RPS26P5-201ENST00000418544 335 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 SNORA25.16-201ENST00000516741 121 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 MIR5582-201ENST00000579697 68 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 MIR924-201ENST00000638017 53 ntBASIC1.4□□□□□ -2.19
SRPK3Q9UPE1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SRPK3Q9UPE1 RNU4-58P-201ENST00000363192 141 ntBASIC1.39□□□□□ -2.19
SRPK3Q9UPE1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.39□□□□□ -2.19
SRPK3Q9UPE1 RNU6-86P-201ENST00000606534 107 ntBASIC1.39□□□□□ -2.19
SRPK3Q9UPE1 Y_RNA.220-201ENST00000364244 109 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 RNU6-1131P-201ENST00000364955 107 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 RNU6-813P-201ENST00000384691 107 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 MIR125B2-201ENST00000385128 89 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 RNU6-531P-201ENST00000516694 104 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 MALAT1.1-201ENST00000618249 95 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
SRPK3Q9UPE1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SRPK3Q9UPE1 RNU6-1255P-201ENST00000363434 112 ntBASIC1.37□□□□□ -2.19
SRPK3Q9UPE1 Y_RNA.342-201ENST00000365352 113 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms