Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU6-509P-201ENST00000363519 107 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 RNY1P11-201ENST00000363759 113 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 RNA5SP205-201ENST00000364653 136 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 U8.6-201ENST00000364939 135 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 RNU6-768P-201ENST00000384683 107 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 RNU6-713P-201ENST00000384761 107 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 SNORD63B-201ENST00000411005 70 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 MTND4LP11-201ENST00000422184 280 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 MTCYBP6-201ENST00000441810 138 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 RNU6-635P-201ENST00000516651 102 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 MIR4473-201ENST00000583731 91 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 RNU1-141P-201ENST00000364623 158 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 RNY4P28-201ENST00000365281 93 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 RNU6-811P-201ENST00000384069 107 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 MIR548I2-201ENST00000408348 149 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 RNU4-69P-201ENST00000410677 143 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 U6.106-201ENST00000636360 105 ntBASIC-0.43□□□□□ -2.48
CTNNA3Q9UI47 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU6-639P-201ENST00000384074 107 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU6-524P-201ENST00000384270 107 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU7-164P-201ENST00000459221 62 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU7-188P-201ENST00000517063 64 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 MTND5P40-201ENST00000559945 246 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 MIR3681-201ENST00000580089 72 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 AC021443.1-201ENST00000604478 211 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 MIR376B-201ENST00000614515 100 ntBASIC-0.44□□□□□ -2.48
CTNNA3Q9UI47 RNU6-275P-201ENST00000364910 107 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 MIR1302-6-201ENST00000408466 90 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 RNU2-38P-201ENST00000410856 79 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 AC093423.1-201ENST00000440817 142 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 MTND1P19-201ENST00000511780 315 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 RNU7-13P-201ENST00000516413 62 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 MIR548AE1-201ENST00000583292 70 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
CTNNA3Q9UI47 MIR409-201ENST00000362237 79 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 RNU6-616P-201ENST00000384353 107 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 MIR519E-201ENST00000385075 84 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 RNU7-74P-201ENST00000459104 62 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 RNU6-175P-201ENST00000516896 107 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 AC138907.4-201ENST00000570107 226 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 AP001362.1-201ENST00000625165 124 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 AL162726.3-218ENST00000636401 95 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.46□□□□□ -2.48
CTNNA3Q9UI47 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 MIR181B2-201ENST00000385004 89 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 MTND2P23-201ENST00000422990 651 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 RNU7-2P-201ENST00000516096 62 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 YWHAEP2-201ENST00000580066 112 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 MIR3149-201ENST00000584629 83 ntBASIC-0.47□□□□□ -2.48
CTNNA3Q9UI47 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 RNU6-170P-201ENST00000362832 104 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 SNORD58.1-201ENST00000391313 66 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 AC074198.2-201ENST00000508153 258 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.48□□□□□ -2.49
CTNNA3Q9UI47 RNU6-309P-201ENST00000364573 106 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 MIR34C-201ENST00000384831 77 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 MIR516A2-201ENST00000384888 90 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 MIR516A1-201ENST00000385033 90 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 SNORD127-201ENST00000458892 86 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 MIR548AZ-201ENST00000616567 95 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 U4.1-201ENST00000620349 87 ntBASIC-0.49□□□□□ -2.49
CTNNA3Q9UI47 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.5□□□□□ -2.49
CTNNA3Q9UI47 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.5□□□□□ -2.49
CTNNA3Q9UI47 SNORD115-35-201ENST00000365122 82 ntBASIC-0.5□□□□□ -2.49
CTNNA3Q9UI47 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms