Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR4771-2-201ENST00000577758 74 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 MIR4500-201ENST00000579472 76 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 MIR4771-1-201ENST00000582617 74 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 AC006254.2-201ENST00000603259 279 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 AC067940.1-201ENST00000458411 300 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 MIR548Z-201ENST00000584743 97 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-86P-201ENST00000606534 107 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 U7.3-201ENST00000616123 62 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
PPARGC1AQ9UBK2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-403P-201ENST00000363163 104 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 MIR6082-201ENST00000613604 109 ntBASIC1.39□□□□□ -2.19
PPARGC1AQ9UBK2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-531P-201ENST00000516694 104 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 SNORA25.16-201ENST00000516741 121 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-844P-201ENST00000517175 102 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 SNORD92-201ENST00000585078 85 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 MIR4781-201ENST00000585250 76 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 RNU7-10P-201ENST00000607194 63 ntBASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
PPARGC1AQ9UBK2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 SNORD58A-201ENST00000383875 65 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 SNORA72.6-201ENST00000384520 129 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 MIR938-201ENST00000401216 83 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-850P-201ENST00000516934 103 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 AP003327.1-201ENST00000529684 127 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 AC103810.7-201ENST00000607821 91 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
PPARGC1AQ9UBK2 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-369P-201ENST00000362515 102 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-49P-201ENST00000384256 107 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.558-201ENST00000384685 113 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 MIR200A-201ENST00000384875 90 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 RNU7-156P-201ENST00000517214 74 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-294P-201ENST00000364999 102 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 FABP5P4-201ENST00000437203 171 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 MIR548H5-201ENST00000580314 60 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 MIR4804-201ENST00000581683 73 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 AL359821.1-201ENST00000605519 182 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 AL136317.1-201ENST00000612653 226 ntBASIC1.35□□□□□ -2.19
PPARGC1AQ9UBK2 MIR101-2-201ENST00000362195 79 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-364P-201ENST00000384387 107 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 MIR100-201ENST00000385259 80 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 RNU6-977P-201ENST00000516411 103 ntBASIC1.34□□□□□ -2.19
PPARGC1AQ9UBK2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.2
PPARGC1AQ9UBK2 MIR181B2-201ENST00000385004 89 ntBASIC1.33□□□□□ -2.2
PPARGC1AQ9UBK2 MIR519A1-201ENST00000385257 85 ntBASIC1.33□□□□□ -2.2
PPARGC1AQ9UBK2 BX276092.1-201ENST00000427368 251 ntBASIC1.33□□□□□ -2.2
PPARGC1AQ9UBK2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.33□□□□□ -2.2
PPARGC1AQ9UBK2 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
PPARGC1AQ9UBK2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 AC026421.1-201ENST00000519101 163 ntBASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
PPARGC1AQ9UBK2 RNU1-119P-201ENST00000391122 165 ntBASIC1.31□□□□□ -2.2
PPARGC1AQ9UBK2 RNA5SP247-201ENST00000411181 105 ntBASIC1.31□□□□□ -2.2
PPARGC1AQ9UBK2 RNU7-56P-201ENST00000458744 62 ntBASIC1.31□□□□□ -2.2
PPARGC1AQ9UBK2 AC013244.2-201ENST00000603396 103 ntBASIC1.31□□□□□ -2.2
PPARGC1AQ9UBK2 RNY1P7-201ENST00000384743 110 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 MIR635-201ENST00000384830 98 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 MIR1302-4-201ENST00000408701 150 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 AC015818.7-201ENST00000428754 109 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 AC087499.7-201ENST00000441958 109 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 RNU7-102P-201ENST00000458948 62 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 U7.7-201ENST00000459276 60 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 RNU6-162P-201ENST00000516228 103 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 AL513043.2-201ENST00000573941 143 ntBASIC1.3□□□□□ -2.2
PPARGC1AQ9UBK2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms