Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-330P-201ENST00000363015 107 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 RNA5SP259-201ENST00000365541 109 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 SNORD41-201ENST00000386967 70 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 MIR764-201ENST00000390811 85 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 AL161935.2-201ENST00000414627 60 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 RN7SL274P-201ENST00000492268 272 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 RNU11-2P-201ENST00000516898 142 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 MIR3198-2-201ENST00000577868 80 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 MIR548H5-201ENST00000580314 60 ntBASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CUEDC1Q9NWM3 SNORA25.4-201ENST00000363666 124 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-499P-201ENST00000365615 107 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 MIR513A1-201ENST00000385138 129 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 MIR1273D-201ENST00000577266 86 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 MIR3675-201ENST00000583661 73 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 MIR8053-201ENST00000613344 75 ntBASIC2.34□□□□□ -2.03
CUEDC1Q9NWM3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.34□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-895P-201ENST00000384125 103 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-630P-201ENST00000391258 106 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 SNORD100-201ENST00000408573 76 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 MIR18B-201ENST00000454574 71 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 SNORA25.16-201ENST00000516741 121 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 AL353997.5-201ENST00000618886 171 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 TRDV1-202ENST00000621643 102 ntBASIC2.33□□□□□ -2.04
CUEDC1Q9NWM3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-1260P-201ENST00000362944 107 ntBASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.371-201ENST00000365591 113 ntBASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.536-201ENST00000384621 113 ntBASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
CUEDC1Q9NWM3 MIR101-2-201ENST00000362195 79 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 RNA5SP289-201ENST00000362332 137 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 SNORD114-1-201ENST00000362705 72 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 SNORD93-201ENST00000408813 74 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 SNRPGP19-201ENST00000603826 189 ntBASIC2.31□□□□□ -2.04
CUEDC1Q9NWM3 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-664P-201ENST00000362381 107 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.443-201ENST00000384135 111 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 RNU7-195P-201ENST00000458793 62 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 TRAJ51-201ENST00000504127 63 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 AC097510.1-201ENST00000510945 133 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.809-201ENST00000516058 95 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 AC046143.2-201ENST00000609789 160 ntBASIC2.3□□□□□ -2.04
CUEDC1Q9NWM3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 RNU1-36P-201ENST00000365130 165 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-580P-201ENST00000365159 107 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 SNORD101-201ENST00000384027 73 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 AC008834.1-201ENST00000511612 175 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 RNU6-922P-201ENST00000516753 99 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 SNORA77B-201ENST00000578179 125 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 MIR4696-201ENST00000581431 70 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 MTRNR2L2-201ENST00000604882 87 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 AC103706.3-201ENST00000636297 85 ntBASIC2.29□□□□□ -2.04
CUEDC1Q9NWM3 SNORA25.3-201ENST00000363205 127 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 RNA5SP99-201ENST00000364020 114 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 AP003716.2-201ENST00000528260 108 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 U6.81-201ENST00000612550 106 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 uc_338.6-201ENST00000613544 171 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 MIR6516-201ENST00000630554 81 ntBASIC2.28□□□□□ -2.04
CUEDC1Q9NWM3 SNORA24B-201ENST00000384176 131 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 MIR9-2-201ENST00000384838 87 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 U8.13-201ENST00000390842 128 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 AL133373.1-201ENST00000497098 94 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 MIR4511-201ENST00000582784 87 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CUEDC1Q9NWM3 SNORD33-201ENST00000362761 85 ntBASIC2.26□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-403P-201ENST00000363163 104 ntBASIC2.26□□□□□ -2.05
CUEDC1Q9NWM3 AC079140.2-201ENST00000506193 142 ntBASIC2.26□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-881P-201ENST00000516813 102 ntBASIC2.26□□□□□ -2.05
CUEDC1Q9NWM3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CUEDC1Q9NWM3 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-669P-201ENST00000365575 107 ntBASIC2.25□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-141P-201ENST00000410499 105 ntBASIC2.25□□□□□ -2.05
CUEDC1Q9NWM3 AC097635.1-201ENST00000450678 155 ntBASIC2.25□□□□□ -2.05
CUEDC1Q9NWM3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 SNORD45A-201ENST00000384512 84 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-935P-201ENST00000410371 100 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 AL606490.4-201ENST00000423117 127 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms