Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-765P-201ENST00000516916 99 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 MIR376B-201ENST00000614515 100 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 AP001362.1-201ENST00000625165 124 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.74□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-364P-201ENST00000384387 107 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.507-201ENST00000384500 99 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 MIR1912-201ENST00000410389 80 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 SNORA7.5-201ENST00000410672 110 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-1006P-201ENST00000516998 103 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-1313P-201ENST00000362622 102 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.98-201ENST00000363109 102 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.119-201ENST00000363301 96 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-865P-201ENST00000364772 107 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 U8.6-201ENST00000364939 135 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.309-201ENST00000365046 111 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.323-201ENST00000365157 109 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 Y_RNA.360-201ENST00000365512 102 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 SNORA72.6-201ENST00000384520 129 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 RNU1-119P-201ENST00000391122 165 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-1194P-201ENST00000516208 104 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-531P-201ENST00000516694 104 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 AC068339.1-201ENST00000526965 141 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 AP003327.1-201ENST00000529684 127 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 AC090897.1-201ENST00000580909 226 ntBASIC0.72□□□□□ -2.29
SLC52A3Q9NQ40 RNU6-409P-201ENST00000384114 104 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-1201P-201ENST00000384227 107 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 MIR573-201ENST00000384964 99 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-1018P-201ENST00000516577 106 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 MIR548AI-201ENST00000579940 88 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
SLC52A3Q9NQ40 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 RNU4-58P-201ENST00000363192 141 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.155-201ENST00000363632 101 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-1107P-201ENST00000364817 104 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 MIR5009-201ENST00000578736 100 ntBASIC0.7□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.49-201ENST00000362714 112 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.247-201ENST00000364500 92 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-215P-201ENST00000365169 102 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.377-201ENST00000365644 108 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 MIR577-201ENST00000385196 96 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 SNORD100-201ENST00000408573 76 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-412P-201ENST00000516434 106 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.709-201ENST00000516952 92 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-448P-201ENST00000517052 107 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.69□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-1325P-201ENST00000364905 105 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-1014P-201ENST00000383940 103 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 RNU6-291P-201ENST00000384720 107 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 AC002350.1-201ENST00000490759 375 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 MIR4694-201ENST00000578534 80 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
SLC52A3Q9NQ40 RNY4P18-201ENST00000391107 89 ntBASIC0.67□□□□□ -2.3
SLC52A3Q9NQ40 SNRPGP12-201ENST00000449481 213 ntBASIC0.67□□□□□ -2.3
SLC52A3Q9NQ40 AL442128.1-201ENST00000615151 90 ntBASIC0.67□□□□□ -2.3
SLC52A3Q9NQ40 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.67□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.32-201ENST00000362589 110 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 SNORD20-201ENST00000384550 80 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.536-201ENST00000384621 113 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.697-201ENST00000516776 113 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 MIR4500-201ENST00000579472 76 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 MIR3613-201ENST00000579844 87 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 uc_338.16-201ENST00000621804 95 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 AL512310.12-203ENST00000640543 90 ntBASIC0.66□□□□□ -2.3
SLC52A3Q9NQ40 Y_RNA.36-201ENST00000362602 112 ntBASIC0.65□□□□□ -2.31
SLC52A3Q9NQ40 RNY3P2-201ENST00000362918 102 ntBASIC0.65□□□□□ -2.31
SLC52A3Q9NQ40 RNU6-832P-201ENST00000363319 107 ntBASIC0.65□□□□□ -2.31
SLC52A3Q9NQ40 RNU6-1099P-201ENST00000363533 107 ntBASIC0.65□□□□□ -2.31
SLC52A3Q9NQ40 SNORD38.1-201ENST00000363863 68 ntBASIC0.65□□□□□ -2.31
SLC52A3Q9NQ40 RNU6-106P-201ENST00000384405 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 316.9 ms