Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.56□□□□□ -2.5
CCDC43Q96MW1 SNORD127-201ENST00000458892 86 ntBASIC-0.56□□□□□ -2.5
CCDC43Q96MW1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 SNORD27-201ENST00000363981 72 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 MIR516B1-201ENST00000385211 90 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 MTND2P23-201ENST00000422990 651 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 MIR3920-201ENST00000581751 86 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 MIR6086-201ENST00000638065 55 ntBASIC-0.57□□□□□ -2.5
CCDC43Q96MW1 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 RNU7-195P-201ENST00000458793 62 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 RNU7-123P-201ENST00000515911 60 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 AC009779.6-201ENST00000603972 165 ntBASIC-0.58□□□□□ -2.5
CCDC43Q96MW1 RNU6-818P-201ENST00000364837 108 ntBASIC-0.59□□□□□ -2.5
CCDC43Q96MW1 MIR548I2-201ENST00000408348 149 ntBASIC-0.59□□□□□ -2.5
CCDC43Q96MW1 MIR548F4-201ENST00000408515 105 ntBASIC-0.59□□□□□ -2.5
CCDC43Q96MW1 MTATP6P21-201ENST00000440681 189 ntBASIC-0.59□□□□□ -2.5
CCDC43Q96MW1 RPS29P8-201ENST00000445109 171 ntBASIC-0.59□□□□□ -2.5
CCDC43Q96MW1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.6□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.6□□□□□ -2.51
CCDC43Q96MW1 SNORA25.13-201ENST00000516395 103 ntBASIC-0.6□□□□□ -2.51
CCDC43Q96MW1 AC108676.2-201ENST00000605225 163 ntBASIC-0.6□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 SNORD49B-201ENST00000365172 72 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 SNORD63B-201ENST00000411005 70 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 AP001362.1-201ENST00000625165 124 ntBASIC-0.61□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.62□□□□□ -2.51
CCDC43Q96MW1 SNORD114-15-201ENST00000364687 72 ntBASIC-0.62□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.62□□□□□ -2.51
CCDC43Q96MW1 SNORD77B-201ENST00000391112 67 ntBASIC-0.62□□□□□ -2.51
CCDC43Q96MW1 RNU6-508P-201ENST00000363231 103 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 RNU6-524P-201ENST00000384270 107 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 AC074198.2-201ENST00000508153 258 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 RNU7-2P-201ENST00000516096 62 ntBASIC-0.63□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.64□□□□□ -2.51
CCDC43Q96MW1 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.64□□□□□ -2.51
CCDC43Q96MW1 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.64□□□□□ -2.51
CCDC43Q96MW1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
CCDC43Q96MW1 MIR519A1-201ENST00000385257 85 ntBASIC-0.64□□□□□ -2.51
CCDC43Q96MW1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 RNU7-74P-201ENST00000459104 62 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 RNU7-106P-201ENST00000459514 67 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 AL117187.1-201ENST00000555482 181 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 MIR3149-201ENST00000584629 83 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 MIR6844-201ENST00000637122 62 ntBASIC-0.65□□□□□ -2.51
CCDC43Q96MW1 RNU6-170P-201ENST00000362832 104 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 RNU6-616P-201ENST00000384353 107 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 SNORA75.5-201ENST00000391291 81 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 SNORD58.1-201ENST00000391313 66 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 RNU6-588P-201ENST00000410281 105 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 MIR4473-201ENST00000583731 91 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 MIR376B-201ENST00000614515 100 ntBASIC-0.66□□□□□ -2.52
CCDC43Q96MW1 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 SNORD14C-201ENST00000365382 88 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 RNU6-918P-201ENST00000391219 106 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 snoU13.19-201ENST00000459148 104 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 MTND5P40-201ENST00000559945 246 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 AC008737.2-201ENST00000599446 118 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 AL162726.3-218ENST00000636401 95 ntBASIC-0.67□□□□□ -2.52
CCDC43Q96MW1 MIR655-201ENST00000362159 97 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 U8.6-201ENST00000364939 135 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 AC244250.2-201ENST00000418731 148 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 AC107027.2-201ENST00000512197 115 ntBASIC-0.68□□□□□ -2.52
CCDC43Q96MW1 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 RNU6-309P-201ENST00000364573 106 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 SNORD18B-201ENST00000365659 72 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 MIR6507-201ENST00000613630 70 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
CCDC43Q96MW1 MIR606-201ENST00000384851 96 ntBASIC-0.7□□□□□ -2.52
CCDC43Q96MW1 SNORD126-201ENST00000459475 77 ntBASIC-0.7□□□□□ -2.52
CCDC43Q96MW1 MIR548AG2-201ENST00000581228 64 ntBASIC-0.7□□□□□ -2.52
CCDC43Q96MW1 MIR4788-201ENST00000639104 80 ntBASIC-0.7□□□□□ -2.52
CCDC43Q96MW1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.7□□□□□ -2.52
CCDC43Q96MW1 RNY1P11-201ENST00000363759 113 ntBASIC-0.71□□□□□ -2.52
CCDC43Q96MW1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms