Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RNU6-403P-201ENST00000363163 104 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RNU6-820P-201ENST00000384273 107 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 SNORD116-22-201ENST00000384430 92 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 SNORD83.1-201ENST00000411362 77 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 RN7SKP12-201ENST00000516275 143 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 IGLL4P-201ENST00000614590 133 ntBASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.28□□□□□ -2.2
PDLIM2Q96JY6 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 RNY1P1-201ENST00000364372 112 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 SNORA72.6-201ENST00000384520 129 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 BX276092.1-201ENST00000427368 251 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 SNORA25.16-201ENST00000516741 121 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 AC020891.4-201ENST00000605745 93 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.27□□□□□ -2.21
PDLIM2Q96JY6 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 RNU6-402P-201ENST00000410678 103 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 SNRPGP12-201ENST00000449481 213 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 RNU7-185P-201ENST00000459215 60 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 RNU6-850P-201ENST00000516934 103 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 AL513043.2-201ENST00000573941 143 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 AC025521.1-201ENST00000621624 286 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
PDLIM2Q96JY6 RNU4-58P-201ENST00000363192 141 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 RNA5SP173-201ENST00000364857 136 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 RNU6-571P-201ENST00000384128 107 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 RNY1P4-201ENST00000384595 115 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 Y_RNA.609-201ENST00000410669 89 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 RNU4-83P-201ENST00000410863 133 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 AC015818.7-201ENST00000428754 109 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 AC087499.7-201ENST00000441958 109 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 MIR8066-201ENST00000617280 78 ntBASIC1.25□□□□□ -2.21
PDLIM2Q96JY6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 RNU7-21P-201ENST00000459430 62 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 MIR4771-2-201ENST00000577758 74 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 MIR4668-201ENST00000582284 70 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 MIR4771-1-201ENST00000582617 74 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
PDLIM2Q96JY6 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
PDLIM2Q96JY6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
PDLIM2Q96JY6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
PDLIM2Q96JY6 RNU6-267P-201ENST00000516714 103 ntBASIC1.23□□□□□ -2.21
PDLIM2Q96JY6 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.23□□□□□ -2.21
PDLIM2Q96JY6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 RNU6-573P-201ENST00000383938 106 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
PDLIM2Q96JY6 MIR101-2-201ENST00000362195 79 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 Y_RNA.73-201ENST00000362910 113 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RNU6-219P-201ENST00000364728 107 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RNU6-675P-201ENST00000384236 104 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 MIR125B2-201ENST00000385128 89 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RNU6-321P-201ENST00000410912 106 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 Y_RNA.620-201ENST00000411009 88 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RNU6-592P-201ENST00000411333 103 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RPS26P5-201ENST00000418544 335 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 AC022137.1-201ENST00000483735 151 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 AC013244.2-201ENST00000603396 103 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 MIR6082-201ENST00000613604 109 ntBASIC1.21□□□□□ -2.22
PDLIM2Q96JY6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 MIR516A2-201ENST00000384888 90 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 MIR516A1-201ENST00000385033 90 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
PDLIM2Q96JY6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PDLIM2Q96JY6 RNU6-1152P-201ENST00000384576 107 ntBASIC1.19□□□□□ -2.22
PDLIM2Q96JY6 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
PDLIM2Q96JY6 MIR4676-201ENST00000583078 72 ntBASIC1.19□□□□□ -2.22
PDLIM2Q96JY6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PDLIM2Q96JY6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PDLIM2Q96JY6 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
PDLIM2Q96JY6 RNU6-242P-201ENST00000384359 107 ntBASIC1.18□□□□□ -2.22
PDLIM2Q96JY6 SNORD100-201ENST00000408573 76 ntBASIC1.18□□□□□ -2.22
PDLIM2Q96JY6 RNU6-519P-201ENST00000410590 108 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms