Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 SNRPGP12-201ENST00000449481 213 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 AC026421.1-201ENST00000519101 163 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 AC106800.4-201ENST00000614905 153 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 SNORD113.3-201ENST00000364630 78 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 RNU1-36P-201ENST00000365130 165 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 SNORD58A-201ENST00000383875 65 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 RNU6-972P-201ENST00000391208 107 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 SNORD83.1-201ENST00000411362 77 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.1□□□□□ -2.23
ZNF549Q6P9A3 MIR26B-201ENST00000362251 77 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 AC015818.7-201ENST00000428754 109 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 AC087499.7-201ENST00000441958 109 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 SPINT5P-201ENST00000448174 155 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 RNU7-185P-201ENST00000459215 60 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 SNORA25.16-201ENST00000516741 121 ntBASIC1.09□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 MIR1302-4-201ENST00000408701 150 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 MIR4500-201ENST00000579472 76 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 AC062037.1-201ENST00000605302 128 ntBASIC1.08□□□□□ -2.24
ZNF549Q6P9A3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 SNORD38.2-201ENST00000384470 69 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 MIR181B2-201ENST00000385004 89 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 SNORD93-201ENST00000408813 74 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 RNY4P29-201ENST00000410801 97 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 RNU6-531P-201ENST00000516694 104 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 RNU6-850P-201ENST00000516934 103 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 MTND5P40-201ENST00000559945 246 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 MIR8066-201ENST00000617280 78 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 AC025521.1-201ENST00000621624 286 ntBASIC1.07□□□□□ -2.24
ZNF549Q6P9A3 AC023934.1-201ENST00000574529 2389 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 SNORD116-10-201ENST00000363791 102 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 RNU6-934P-201ENST00000365154 107 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 RNU6-53P-201ENST00000365367 106 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 RNU6-571P-201ENST00000384128 107 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 BX276092.1-201ENST00000427368 251 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 AL513043.2-201ENST00000573941 143 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ZNF549Q6P9A3 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 RNU6-219P-201ENST00000364728 107 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 RNU6-497P-201ENST00000365316 104 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 RNU6-675P-201ENST00000384236 104 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 RPS26P5-201ENST00000418544 335 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 SNORA72.7-201ENST00000516349 94 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 MIR8070-201ENST00000616510 88 ntBASIC1.05□□□□□ -2.24
ZNF549Q6P9A3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 MIR125B2-201ENST00000385128 89 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 RNU7-90P-201ENST00000459216 62 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 MIR4771-2-201ENST00000577758 74 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 MIR4771-1-201ENST00000582617 74 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 MIR6082-201ENST00000613604 109 ntBASIC1.04□□□□□ -2.24
ZNF549Q6P9A3 RNU6-403P-201ENST00000363163 104 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 SNORA25.9-201ENST00000365087 128 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 MIR1257-201ENST00000408490 117 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNA5SP247-201ENST00000411181 105 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 AC002429.1-201ENST00000437672 148 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNU6-267P-201ENST00000516714 103 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 MIR4676-201ENST00000583078 72 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 AC013244.2-201ENST00000603396 103 ntBASIC1.03□□□□□ -2.24
ZNF549Q6P9A3 RNU4-58P-201ENST00000363192 141 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 RNU6-480P-201ENST00000384332 107 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 MIR450A2-201ENST00000385022 100 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 RNU6-402P-201ENST00000410678 103 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 RN7SKP12-201ENST00000516275 143 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 MIR4668-201ENST00000582284 70 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 SNORD92-201ENST00000585078 85 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
ZNF549Q6P9A3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF549Q6P9A3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms