Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU1-92P-201ENST00000517017 135 ntBASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 ZNF209P-201ENST00000593450 2304 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 SNORD93-201ENST00000408813 74 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 RNU6-402P-201ENST00000410678 103 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 uc_338.6-201ENST00000613544 171 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
PRPF40BQ6NWY9 SNORA72.6-201ENST00000384520 129 ntBASIC1.91□□□□□ -2.1
PRPF40BQ6NWY9 MIR517C-201ENST00000385103 95 ntBASIC1.91□□□□□ -2.1
PRPF40BQ6NWY9 RPS27P16-201ENST00000425758 201 ntBASIC1.91□□□□□ -2.1
PRPF40BQ6NWY9 MIR18B-201ENST00000454574 71 ntBASIC1.91□□□□□ -2.1
PRPF40BQ6NWY9 SNORA31.24-201ENST00000517232 57 ntBASIC1.91□□□□□ -2.1
PRPF40BQ6NWY9 MIR181B2-201ENST00000385004 89 ntBASIC1.9□□□□□ -2.11
PRPF40BQ6NWY9 AC048334.1-201ENST00000477975 159 ntBASIC1.9□□□□□ -2.11
PRPF40BQ6NWY9 SNORA31.2-201ENST00000516019 134 ntBASIC1.9□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-902P-201ENST00000517212 91 ntBASIC1.9□□□□□ -2.11
PRPF40BQ6NWY9 MIR4668-201ENST00000582284 70 ntBASIC1.9□□□□□ -2.11
PRPF40BQ6NWY9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 Y_RNA.57-201ENST00000362806 113 ntBASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 SNORD114-26-201ENST00000363543 72 ntBASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 RNY1P4-201ENST00000384595 115 ntBASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 Y_RNA.609-201ENST00000410669 89 ntBASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 AC022137.1-201ENST00000483735 151 ntBASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.89□□□□□ -2.11
PRPF40BQ6NWY9 AC023934.1-201ENST00000574529 2389 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-403P-201ENST00000363163 104 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-242P-201ENST00000384359 107 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 MIR1257-201ENST00000408490 117 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 BX276092.1-201ENST00000427368 251 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PRPF40BQ6NWY9 RNU4-58P-201ENST00000363192 141 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-580P-201ENST00000365159 107 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 AL513043.2-201ENST00000573941 143 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 MIR8066-201ENST00000617280 78 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 AL353770.2-201ENST00000620024 78 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 AC025521.1-201ENST00000621624 286 ntBASIC1.87□□□□□ -2.11
PRPF40BQ6NWY9 Y_RNA.73-201ENST00000362910 113 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-571P-201ENST00000384128 107 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-675P-201ENST00000384236 104 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 SNRPGP12-201ENST00000449481 213 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-850P-201ENST00000516934 103 ntBASIC1.86□□□□□ -2.11
PRPF40BQ6NWY9 SNORD113.3-201ENST00000364630 78 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 RNU1-36P-201ENST00000365130 165 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 SNORD114-22-201ENST00000365423 72 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-573P-201ENST00000383938 106 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-592P-201ENST00000411333 103 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 SNORD83.1-201ENST00000411362 77 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 AL354695.1-201ENST00000427935 228 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 MIR4491-201ENST00000581087 68 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 MIR1245B-201ENST00000636115 69 ntBASIC1.85□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-497P-201ENST00000365316 104 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-1152P-201ENST00000384576 107 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 SNORA75.2-201ENST00000391138 150 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 SNORA75.3-201ENST00000391231 150 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 RNU4-83P-201ENST00000410863 133 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-531P-201ENST00000516694 104 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-267P-201ENST00000516714 103 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 SNORA25.16-201ENST00000516741 121 ntBASIC1.84□□□□□ -2.11
PRPF40BQ6NWY9 RNU6-219P-201ENST00000364728 107 ntBASIC1.83□□□□□ -2.12
PRPF40BQ6NWY9 Y_RNA.374-201ENST00000365606 101 ntBASIC1.83□□□□□ -2.12
PRPF40BQ6NWY9 RNU7-185P-201ENST00000459215 60 ntBASIC1.83□□□□□ -2.12
PRPF40BQ6NWY9 AC008163.1-202ENST00000636004 2889 ntBASIC1.83□□□□□ -2.12
PRPF40BQ6NWY9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-934P-201ENST00000365154 107 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 MIR1304-201ENST00000408243 91 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-519P-201ENST00000410590 108 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 AL591704.2-201ENST00000421658 181 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 snoU13.21-201ENST00000459368 105 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 AP003327.1-201ENST00000529684 127 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 AC023827.1-201ENST00000569247 97 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 MIR4771-2-201ENST00000577758 74 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 MIR4771-1-201ENST00000582617 74 ntBASIC1.82□□□□□ -2.12
PRPF40BQ6NWY9 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 MIR320A-201ENST00000385302 82 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 AC020891.4-201ENST00000605745 93 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 MIR6515-201ENST00000619843 57 ntBASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPF40BQ6NWY9 Y_RNA.219-201ENST00000364232 113 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-910P-201ENST00000390844 107 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-994P-201ENST00000410507 111 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 Y_RNA.611-201ENST00000410682 108 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 AL161932.1-201ENST00000437408 146 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 AC023790.1-201ENST00000482174 347 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 AC036111.3-201ENST00000526389 112 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PRPF40BQ6NWY9 MIR96-201ENST00000362288 78 ntBASIC1.79□□□□□ -2.12
PRPF40BQ6NWY9 RNU6-1276P-201ENST00000365372 104 ntBASIC1.79□□□□□ -2.12
PRPF40BQ6NWY9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF40BQ6NWY9 SNORA80D-201ENST00000384488 135 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms