Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNORD38.1-201ENST00000363863 68 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 RNU6-1163P-201ENST00000364516 107 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 Y_RNA.330-201ENST00000365230 109 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 SNORA2B-201ENST00000384583 137 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 MT-TF-201ENST00000387314 71 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 AC109327.2-201ENST00000448339 378 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 MALAT1.1-201ENST00000618249 95 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 AP001362.1-201ENST00000625165 124 ntBASIC1.44□□□□□ -2.18
KRT40Q6A162 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRT40Q6A162 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRT40Q6A162 SNORD45B-201ENST00000364617 72 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 RNY1P2-201ENST00000364820 117 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 Y_RNA.290-201ENST00000364879 114 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 AC015818.7-201ENST00000428754 109 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 AC087499.7-201ENST00000441958 109 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 RPS29P28-201ENST00000446439 141 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 RNU7-21P-201ENST00000459430 62 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 AC133485.1-201ENST00000567176 124 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 U6.109-201ENST00000636749 87 ntBASIC1.43□□□□□ -2.18
KRT40Q6A162 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
KRT40Q6A162 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 Y_RNA.588-201ENST00000391254 102 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 AC020891.4-201ENST00000605745 93 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 AC012676.2-201ENST00000619258 186 ntBASIC1.42□□□□□ -2.18
KRT40Q6A162 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRT40Q6A162 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRT40Q6A162 RNA5SP133-201ENST00000363368 119 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 MIR548G-201ENST00000408442 89 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 SNORD83.1-201ENST00000411362 77 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 MIR18B-201ENST00000454574 71 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 AC023827.1-201ENST00000569247 97 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 AC090897.1-201ENST00000580909 226 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 AC096720.1-201ENST00000604441 183 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 U7.3-201ENST00000616123 62 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 MIR2052-201ENST00000636055 55 ntBASIC1.41□□□□□ -2.18
KRT40Q6A162 HSBP1P2-201ENST00000299671 229 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 Y_RNA.173-201ENST00000363776 113 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 SNORD113.3-201ENST00000364630 78 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 RNU6-162P-201ENST00000516228 103 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 MIR4491-201ENST00000581087 68 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 AC106800.4-201ENST00000614905 153 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 AC008163.1-202ENST00000636004 2889 ntBASIC1.4□□□□□ -2.19
KRT40Q6A162 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 RNU1-36P-201ENST00000365130 165 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 RNY1P4-201ENST00000384595 115 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 AL591704.2-201ENST00000421658 181 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 MIR4439-201ENST00000583746 80 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 RNU6-86P-201ENST00000606534 107 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.39□□□□□ -2.19
KRT40Q6A162 Y_RNA.119-201ENST00000363301 96 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 RNU6-1244P-201ENST00000363614 108 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 SNORA80D-201ENST00000384488 135 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 RNU7-185P-201ENST00000459215 60 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 SNORA25.16-201ENST00000516741 121 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 RN7SL793P-201ENST00000583259 296 ntBASIC1.38□□□□□ -2.19
KRT40Q6A162 SNRPGP12-201ENST00000449481 213 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.37□□□□□ -2.19
KRT40Q6A162 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 RNU6-844P-201ENST00000517175 102 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 AC006254.2-201ENST00000603259 279 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 RNU6-90P-201ENST00000606352 106 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 AC103810.7-201ENST00000607821 91 ntBASIC1.37□□□□□ -2.19
KRT40Q6A162 AC023934.1-201ENST00000574529 2389 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 RNU6-813P-201ENST00000384691 107 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 RNU4-83P-201ENST00000410863 133 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 SPINT5P-201ENST00000448174 155 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 Y_RNA.705-201ENST00000516862 110 ntBASIC1.36□□□□□ -2.19
KRT40Q6A162 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRT40Q6A162 Y_RNA.220-201ENST00000364244 109 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 RNU6-294P-201ENST00000364999 102 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 RNU6-934P-201ENST00000365154 107 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 Y_RNA.567-201ENST00000384736 106 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 SNORD111-201ENST00000408139 94 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 RNU6-887P-201ENST00000410660 100 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 RNU6-531P-201ENST00000516694 104 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 MIR4500-201ENST00000579472 76 ntBASIC1.35□□□□□ -2.19
KRT40Q6A162 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRT40Q6A162 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRT40Q6A162 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 Y_RNA.190-201ENST00000363964 101 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 BX276092.1-201ENST00000427368 251 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 SNORA70.22-201ENST00000517160 124 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 MTND5P40-201ENST00000559945 246 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 MIR4771-2-201ENST00000577758 74 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 MIR4771-1-201ENST00000582617 74 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 MIR8066-201ENST00000617280 78 ntBASIC1.34□□□□□ -2.19
KRT40Q6A162 SNORD38.2-201ENST00000384470 69 ntBASIC1.33□□□□□ -2.2
KRT40Q6A162 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
KRT40Q6A162 RNU6-972P-201ENST00000391208 107 ntBASIC1.33□□□□□ -2.2
KRT40Q6A162 MIR1257-201ENST00000408490 117 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms