Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AC025627.3-201ENST00000582078 182 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 RNU7-10P-201ENST00000607194 63 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
ZNF394Q53GI3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 RNU6-571P-201ENST00000384128 107 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 MIR590-201ENST00000385008 97 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 SNORD124-201ENST00000459577 104 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 RNU6-531P-201ENST00000516694 104 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 RMST_2.1-201ENST00000617263 136 ntBASIC1.41□□□□□ -2.18
ZNF394Q53GI3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.41□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZNF394Q53GI3 RNA5SP247-201ENST00000411181 105 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 RNU7-102P-201ENST00000458948 62 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 MIR3613-201ENST00000579844 87 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.4□□□□□ -2.19
ZNF394Q53GI3 MIR2052-201ENST00000636055 55 ntBASIC1.4□□□□□ -2.19
ZNF394Q53GI3 MIR101-2-201ENST00000362195 79 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 SNORA19.1-201ENST00000410656 129 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 SPINT5P-201ENST00000448174 155 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 SNRPGP12-201ENST00000449481 213 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.39□□□□□ -2.19
ZNF394Q53GI3 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 SNORD105-201ENST00000386910 85 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
ZNF394Q53GI3 RNA5SP255-201ENST00000516370 107 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 MIR548H5-201ENST00000580314 60 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.36□□□□□ -2.19
ZNF394Q53GI3 RNU6-170P-201ENST00000362832 104 ntBASIC1.36□□□□□ -2.19
ZNF394Q53GI3 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 SNORA40.13-201ENST00000516379 120 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 AC013244.2-201ENST00000603396 103 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
ZNF394Q53GI3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 MIR520H-201ENST00000385126 88 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 RNU6-168P-201ENST00000516189 101 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 MIR4661-201ENST00000582720 75 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 AP001318.4-201ENST00000616637 121 ntBASIC1.34□□□□□ -2.19
ZNF394Q53GI3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.33□□□□□ -2.2
ZNF394Q53GI3 RNU6-480P-201ENST00000384332 107 ntBASIC1.33□□□□□ -2.2
ZNF394Q53GI3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 BX276092.1-201ENST00000427368 251 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 AC109327.2-201ENST00000448339 378 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 RNU6-850P-201ENST00000516934 103 ntBASIC1.32□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 RNU6-813P-201ENST00000384691 107 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 MIR635-201ENST00000384830 98 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 RNU6-109P-201ENST00000516364 107 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 RNU6-184P-201ENST00000516514 107 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 AC008608.1-201ENST00000603910 127 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 AC012531.4-201ENST00000616509 177 ntBASIC1.31□□□□□ -2.2
ZNF394Q53GI3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.3□□□□□ -2.2
ZNF394Q53GI3 RNU6-972P-201ENST00000391208 107 ntBASIC1.3□□□□□ -2.2
ZNF394Q53GI3 MTATP8P2-201ENST00000435212 202 ntBASIC1.3□□□□□ -2.2
ZNF394Q53GI3 RNU6-795P-201ENST00000516323 103 ntBASIC1.3□□□□□ -2.2
ZNF394Q53GI3 MIR4777-201ENST00000583710 86 ntBASIC1.3□□□□□ -2.2
ZNF394Q53GI3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.3□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 SNORA25.9-201ENST00000365087 128 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ZNF394Q53GI3 RNU6-535P-201ENST00000384722 107 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 MIR519A1-201ENST00000385257 85 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 MIR1287-201ENST00000408492 90 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 RNA5SP89-201ENST00000410300 108 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 AC091304.10-201ENST00000641554 121 ntBASIC1.29□□□□□ -2.2
ZNF394Q53GI3 AC138907.6-201ENST00000568401 126 ntBASIC1.28□□□□□ -2.2
ZNF394Q53GI3 AC138869.1-201ENST00000568623 124 ntBASIC1.28□□□□□ -2.2
ZNF394Q53GI3 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
ZNF394Q53GI3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.27□□□□□ -2.21
ZNF394Q53GI3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.27□□□□□ -2.21
ZNF394Q53GI3 RNU6-291P-201ENST00000384720 107 ntBASIC1.27□□□□□ -2.21
ZNF394Q53GI3 OR2A41P-201ENST00000473586 105 ntBASIC1.27□□□□□ -2.21
ZNF394Q53GI3 RNU6-135P-201ENST00000516769 101 ntBASIC1.27□□□□□ -2.21
ZNF394Q53GI3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ZNF394Q53GI3 MIR499A-201ENST00000384903 122 ntBASIC1.26□□□□□ -2.21
ZNF394Q53GI3 MIR573-201ENST00000384964 99 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms