Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 RNU6-949P-201ENST00000384040 107 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 MIR563-201ENST00000385080 79 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 RNU6-613P-201ENST00000410412 108 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 RNU6-267P-201ENST00000516714 103 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 RNU11-2P-201ENST00000516898 142 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 MIR4264-201ENST00000583520 66 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 AC096720.1-201ENST00000604441 183 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 RNU6-86P-201ENST00000606534 107 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 U7.3-201ENST00000616123 62 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
SLC44A4Q53GD3 MIR30D-201ENST00000362283 70 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 Y_RNA.17-201ENST00000362433 111 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 RNU6-787P-201ENST00000384032 107 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 SNORA2B-201ENST00000384583 137 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 U8.15-201ENST00000390947 134 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 AC020891.4-201ENST00000605745 93 ntBASIC1.31□□□□□ -2.2
SLC44A4Q53GD3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 RNU6-972P-201ENST00000391208 107 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 RNA5SP225-201ENST00000410874 135 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 AC096949.1-201ENST00000412047 152 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 AC036111.3-201ENST00000526389 112 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
SLC44A4Q53GD3 RNU6-228P-201ENST00000362700 106 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 SNORD38.1-201ENST00000363863 68 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 MIR450A2-201ENST00000385022 100 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-447P-201ENST00000410293 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-355P-201ENST00000410427 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-791P-201ENST00000410467 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-705P-201ENST00000410601 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-860P-201ENST00000410860 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-785P-201ENST00000411324 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNA5SP395-201ENST00000516567 118 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 U6.90-201ENST00000614007 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 U6.70-201ENST00000620287 104 ntBASIC1.29□□□□□ -2.2
SLC44A4Q53GD3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 MIR548G-201ENST00000408442 89 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 SPINT5P-201ENST00000448174 155 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 AC138749.4-201ENST00000563970 127 ntBASIC1.28□□□□□ -2.2
SLC44A4Q53GD3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 RNU6-219P-201ENST00000364728 107 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 AP003327.1-201ENST00000529684 127 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 MTND5P40-201ENST00000559945 246 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 RNU6-90P-201ENST00000606352 106 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 AC103810.7-201ENST00000607821 91 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 AP001362.1-201ENST00000625165 124 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 U6.109-201ENST00000636749 87 ntBASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SLC44A4Q53GD3 RNA5SP133-201ENST00000363368 119 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 SNORD114-26-201ENST00000363543 72 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 RNU6-580P-201ENST00000365159 107 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 RNU6-813P-201ENST00000384691 107 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 RNU6-402P-201ENST00000410678 103 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 AC022137.1-201ENST00000483735 151 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 MIR4500-201ENST00000579472 76 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 AC090897.1-201ENST00000580909 226 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
SLC44A4Q53GD3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 RNY1P2-201ENST00000364820 117 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 RNU6-497P-201ENST00000365316 104 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 RNU6-675P-201ENST00000384236 104 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 SNORD78.1-201ENST00000390866 65 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 RNU6-887P-201ENST00000410660 100 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 AC015818.7-201ENST00000428754 109 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 AC087499.7-201ENST00000441958 109 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SLC44A4Q53GD3 MIR4439-201ENST00000583746 80 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms