Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RNU6-765P-201ENST00000516916 99 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 uc_338.28-201ENST00000612082 187 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 AL442128.1-201ENST00000615151 90 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
SNAI3Q3KNW1 SNORA63.4-201ENST00000362763 126 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNY3P2-201ENST00000362918 102 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.78-201ENST00000362970 110 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.81-201ENST00000362997 102 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.247-201ENST00000364500 92 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU7-102P-201ENST00000458948 62 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNU6-531P-201ENST00000516694 104 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 MIR3613-201ENST00000579844 87 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 AC008608.1-201ENST00000603910 127 ntBASIC0.7□□□□□ -2.3
SNAI3Q3KNW1 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU4-58P-201ENST00000363192 141 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNY1P10-201ENST00000363268 113 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORD38.1-201ENST00000363863 68 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORA72.6-201ENST00000384520 129 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU6-904P-201ENST00000516206 101 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 MIR4500-201ENST00000579472 76 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 AC090897.1-201ENST00000580909 226 ntBASIC0.69□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 RNU6-537P-201ENST00000517277 103 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 DEFB131E-201ENST00000532329 154 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
SNAI3Q3KNW1 RNU6-766P-201ENST00000362478 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU4-36P-201ENST00000364294 144 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU6-756P-201ENST00000383997 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORA51.5-201ENST00000384126 131 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 RNU6-1113P-201ENST00000384348 107 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORD38.2-201ENST00000384470 69 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.601-201ENST00000410500 113 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 SNORA19.1-201ENST00000410656 129 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 AL031737.1-201ENST00000450125 223 ntBASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
SNAI3Q3KNW1 Y_RNA.10-201ENST00000362371 110 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 RNU6-147P-201ENST00000383983 107 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR590-201ENST00000385008 97 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR548G-201ENST00000408442 89 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 SNRPGP12-201ENST00000449481 213 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AC096720.1-201ENST00000604441 183 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
SNAI3Q3KNW1 MIR450A1-201ENST00000362262 91 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.173-201ENST00000363776 113 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU6-1163P-201ENST00000364516 107 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU1-93P-201ENST00000364704 169 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 BX276092.1-201ENST00000427368 251 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 RNU6-448P-201ENST00000517052 107 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 MTND5P40-201ENST00000559945 246 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-153P-201ENST00000364422 104 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-571P-201ENST00000384128 107 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-291P-201ENST00000384720 107 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SNORD100-201ENST00000408573 76 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SPINT5P-201ENST00000448174 155 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC109327.2-201ENST00000448339 378 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.659-201ENST00000515994 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 SCARNA23-201ENST00000516060 130 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 RNU6-850P-201ENST00000516934 103 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 MIR4439-201ENST00000583746 80 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.818-201ENST00000618813 71 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 AC091304.10-201ENST00000641554 121 ntBASIC0.64□□□□□ -2.31
SNAI3Q3KNW1 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 Y_RNA.95-201ENST00000363079 95 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 SNORD45B-201ENST00000364617 72 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-109P-201ENST00000516364 107 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 RNU6-184P-201ENST00000516514 107 ntBASIC0.63□□□□□ -2.31
SNAI3Q3KNW1 MIR4777-201ENST00000583710 86 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 1240.1 ms