Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.21□□□□□ -2.76
TPM4P67936 RNY4P3-201ENST00000365254 95 ntBASIC-2.21□□□□□ -2.76
TPM4P67936 AL442663.2-201ENST00000554385 511 ntBASIC-2.21□□□□□ -2.76
TPM4P67936 MIR548O2-201ENST00000616090 70 ntBASIC-2.21□□□□□ -2.76
TPM4P67936 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.21□□□□□ -2.76
TPM4P67936 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.22□□□□□ -2.76
TPM4P67936 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.22□□□□□ -2.76
TPM4P67936 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.22□□□□□ -2.76
TPM4P67936 MIR3165-201ENST00000579874 75 ntBASIC-2.22□□□□□ -2.76
TPM4P67936 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.23□□□□□ -2.77
TPM4P67936 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.23□□□□□ -2.77
TPM4P67936 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.23□□□□□ -2.77
TPM4P67936 MIR3115-201ENST00000577915 68 ntBASIC-2.23□□□□□ -2.77
TPM4P67936 AC092794.1-201ENST00000612734 582 ntBASIC-2.23□□□□□ -2.77
TPM4P67936 SNORA63.7-201ENST00000365579 123 ntBASIC-2.24□□□□□ -2.77
TPM4P67936 RNU6-381P-201ENST00000391259 108 ntBASIC-2.24□□□□□ -2.77
TPM4P67936 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 RNA5SP192-201ENST00000364404 120 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 Y_RNA.433-201ENST00000384089 102 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 RNU6-588P-201ENST00000410281 105 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 AL161932.1-201ENST00000437408 146 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 RNU6-718P-201ENST00000516166 105 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 AP000770.2-201ENST00000623694 100 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 snoR1.1-201ENST00000628177 80 ntBASIC-2.25□□□□□ -2.77
TPM4P67936 SNORD27-201ENST00000363981 72 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 SNORD115-23-201ENST00000364461 82 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 MIR587-201ENST00000384845 96 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.26□□□□□ -2.77
TPM4P67936 RNU7-134P-201ENST00000458997 64 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 RNA5SP236-201ENST00000516169 116 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 RNA5SP395-201ENST00000516567 118 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 RNU6-706P-201ENST00000517229 104 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 AC090574.1-201ENST00000623186 233 ntBASIC-2.26□□□□□ -2.77
TPM4P67936 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 MIR1302-11-201ENST00000408051 138 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 MIR1302-9-201ENST00000408365 138 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 MIR548F1-201ENST00000408667 84 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 MIR1302-10-201ENST00000408734 138 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 RNU6-121P-201ENST00000410525 99 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 RNU6-479P-201ENST00000516348 105 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 MIR1302-2-201ENST00000607096 138 ntBASIC-2.27□□□□□ -2.77
TPM4P67936 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 SNORD116-6-201ENST00000384711 96 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 RNU6-243P-201ENST00000391140 107 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 RNU7-152P-201ENST00000458982 64 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 RNU7-164P-201ENST00000459221 62 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 AC021443.1-201ENST00000604478 211 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 AC084781.2-201ENST00000615568 161 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 MIR6086-201ENST00000638065 55 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 AC132825.6-201ENST00000638861 357 ntBASIC-2.28□□□□□ -2.77
TPM4P67936 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.29□□□□□ -2.78
TPM4P67936 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.29□□□□□ -2.78
TPM4P67936 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.29□□□□□ -2.78
TPM4P67936 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.29□□□□□ -2.78
TPM4P67936 RNU6-720P-201ENST00000516363 108 ntBASIC-2.29□□□□□ -2.78
TPM4P67936 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 Y_RNA.374-201ENST00000365606 101 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 MIR34C-201ENST00000384831 77 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 MIR124-2-201ENST00000385081 109 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 RNU7-123P-201ENST00000515911 60 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 AC138907.4-201ENST00000570107 226 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.3□□□□□ -2.78
TPM4P67936 Y_RNA.52-201ENST00000362760 96 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 Y_RNA.60-201ENST00000362831 98 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 SNORD36A-201ENST00000362874 73 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 RNU6-616P-201ENST00000384353 107 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 AL121914.1-201ENST00000450188 156 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 AC084782.3-201ENST00000612282 578 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 MIR6773-201ENST00000612812 74 ntBASIC-2.31□□□□□ -2.78
TPM4P67936 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.32□□□□□ -2.78
TPM4P67936 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.32□□□□□ -2.78
TPM4P67936 SNORD114-4-201ENST00000363962 75 ntBASIC-2.32□□□□□ -2.78
TPM4P67936 RNU6-976P-201ENST00000516086 111 ntBASIC-2.32□□□□□ -2.78
TPM4P67936 RNU6-240P-201ENST00000516098 97 ntBASIC-2.32□□□□□ -2.78
TPM4P67936 RNU6-337P-201ENST00000391243 106 ntBASIC-2.33□□□□□ -2.78
TPM4P67936 AC138393.2-201ENST00000414742 246 ntBASIC-2.33□□□□□ -2.78
TPM4P67936 snoU13.19-201ENST00000459148 104 ntBASIC-2.33□□□□□ -2.78
TPM4P67936 snoU13.11-201ENST00000459219 104 ntBASIC-2.33□□□□□ -2.78
TPM4P67936 RNU6-103P-201ENST00000363686 107 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 RNU4-24P-201ENST00000364565 139 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 SNORD38.2-201ENST00000384470 69 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 MIRLET7B-201ENST00000385140 83 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 SNORD2.1-201ENST00000458762 69 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 RNU6-762P-201ENST00000517107 102 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 AC026421.1-201ENST00000519101 163 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 AC138207.3-201ENST00000585289 166 ntBASIC-2.34□□□□□ -2.78
TPM4P67936 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.35□□□□□ -2.79
TPM4P67936 MIR8485-201ENST00000401372 91 ntBASIC-2.35□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms