Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
CDH12P55289 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CDH12P55289 RNU6-1107P-201ENST00000364817 104 ntBASIC0.76□□□□□ -2.29
CDH12P55289 Y_RNA.323-201ENST00000365157 109 ntBASIC0.76□□□□□ -2.29
CDH12P55289 RNU6-1201P-201ENST00000384227 107 ntBASIC0.76□□□□□ -2.29
CDH12P55289 Y_RNA.536-201ENST00000384621 113 ntBASIC0.76□□□□□ -2.29
CDH12P55289 RNU6-291P-201ENST00000384720 107 ntBASIC0.76□□□□□ -2.29
CDH12P55289 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CDH12P55289 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
CDH12P55289 MIR3612-201ENST00000579753 87 ntBASIC0.76□□□□□ -2.29
CDH12P55289 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
CDH12P55289 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.76□□□□□ -2.29
CDH12P55289 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CDH12P55289 Y_RNA.49-201ENST00000362714 112 ntBASIC0.75□□□□□ -2.29
CDH12P55289 MIR577-201ENST00000385196 96 ntBASIC0.75□□□□□ -2.29
CDH12P55289 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.75□□□□□ -2.29
CDH12P55289 BX276092.1-201ENST00000427368 251 ntBASIC0.75□□□□□ -2.29
CDH12P55289 RNU6-412P-201ENST00000516434 106 ntBASIC0.75□□□□□ -2.29
CDH12P55289 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
CDH12P55289 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
CDH12P55289 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.75□□□□□ -2.29
CDH12P55289 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
CDH12P55289 Y_RNA.32-201ENST00000362589 110 ntBASIC0.74□□□□□ -2.29
CDH12P55289 RNU6-1325P-201ENST00000364905 105 ntBASIC0.74□□□□□ -2.29
CDH12P55289 RNU6-1014P-201ENST00000383940 103 ntBASIC0.74□□□□□ -2.29
CDH12P55289 RNU6-535P-201ENST00000384722 107 ntBASIC0.74□□□□□ -2.29
CDH12P55289 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CDH12P55289 AL442128.1-201ENST00000615151 90 ntBASIC0.74□□□□□ -2.29
CDH12P55289 uc_338.16-201ENST00000621804 95 ntBASIC0.74□□□□□ -2.29
CDH12P55289 MIR101-2-201ENST00000362195 79 ntBASIC0.73□□□□□ -2.29
CDH12P55289 RNA5SP245-201ENST00000364239 121 ntBASIC0.73□□□□□ -2.29
CDH12P55289 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CDH12P55289 SNRPGP12-201ENST00000449481 213 ntBASIC0.73□□□□□ -2.29
CDH12P55289 SNORA31.14-201ENST00000516728 116 ntBASIC0.73□□□□□ -2.29
CDH12P55289 Y_RNA.709-201ENST00000516952 92 ntBASIC0.73□□□□□ -2.29
CDH12P55289 MIR4694-201ENST00000578534 80 ntBASIC0.73□□□□□ -2.29
CDH12P55289 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.73□□□□□ -2.29
CDH12P55289 MIR18A-201ENST00000362310 71 ntBASIC0.72□□□□□ -2.29
CDH12P55289 RNU6-1099P-201ENST00000363533 107 ntBASIC0.72□□□□□ -2.29
CDH12P55289 SNORD38.1-201ENST00000363863 68 ntBASIC0.72□□□□□ -2.29
CDH12P55289 Y_RNA.377-201ENST00000365644 108 ntBASIC0.72□□□□□ -2.29
CDH12P55289 SNORD20-201ENST00000384550 80 ntBASIC0.72□□□□□ -2.29
CDH12P55289 RNA5SP222-201ENST00000411039 105 ntBASIC0.72□□□□□ -2.29
CDH12P55289 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
CDH12P55289 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CDH12P55289 MIR3613-201ENST00000579844 87 ntBASIC0.72□□□□□ -2.29
CDH12P55289 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
CDH12P55289 Y_RNA.56-201ENST00000362798 112 ntBASIC0.71□□□□□ -2.3
CDH12P55289 RNY3P2-201ENST00000362918 102 ntBASIC0.71□□□□□ -2.3
CDH12P55289 RNU6-832P-201ENST00000363319 107 ntBASIC0.71□□□□□ -2.3
CDH12P55289 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
CDH12P55289 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
CDH12P55289 SNORD38.2-201ENST00000384470 69 ntBASIC0.71□□□□□ -2.3
CDH12P55289 RNY4P18-201ENST00000391107 89 ntBASIC0.71□□□□□ -2.3
CDH12P55289 MIR6767-201ENST00000637302 66 ntBASIC0.71□□□□□ -2.3
CDH12P55289 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CDH12P55289 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
CDH12P55289 RNU6-215P-201ENST00000365169 102 ntBASIC0.7□□□□□ -2.3
CDH12P55289 MIR644A-201ENST00000385262 94 ntBASIC0.7□□□□□ -2.3
CDH12P55289 MIR548G-201ENST00000408442 89 ntBASIC0.7□□□□□ -2.3
CDH12P55289 MTND5P40-201ENST00000559945 246 ntBASIC0.7□□□□□ -2.3
CDH12P55289 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
CDH12P55289 Y_RNA.164-201ENST00000363709 102 ntBASIC0.69□□□□□ -2.3
CDH12P55289 Y_RNA.174-201ENST00000363781 105 ntBASIC0.69□□□□□ -2.3
CDH12P55289 RNU6-571P-201ENST00000384128 107 ntBASIC0.69□□□□□ -2.3
CDH12P55289 RNU6-106P-201ENST00000384405 107 ntBASIC0.69□□□□□ -2.3
CDH12P55289 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
CDH12P55289 SPINT5P-201ENST00000448174 155 ntBASIC0.69□□□□□ -2.3
CDH12P55289 TRAJ51-201ENST00000504127 63 ntBASIC0.69□□□□□ -2.3
CDH12P55289 RNU6-850P-201ENST00000516934 103 ntBASIC0.69□□□□□ -2.3
CDH12P55289 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
CDH12P55289 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
CDH12P55289 MIR548H5-201ENST00000580314 60 ntBASIC0.69□□□□□ -2.3
CDH12P55289 Y_RNA.163-201ENST00000363702 113 ntBASIC0.68□□□□□ -2.3
CDH12P55289 RNU6-554P-201ENST00000410466 106 ntBASIC0.68□□□□□ -2.3
CDH12P55289 SNORA19.1-201ENST00000410656 129 ntBASIC0.68□□□□□ -2.3
CDH12P55289 MIR3678-201ENST00000578455 94 ntBASIC0.68□□□□□ -2.3
CDH12P55289 RNU6-90P-201ENST00000606352 106 ntBASIC0.68□□□□□ -2.3
CDH12P55289 uc_338.28-201ENST00000612082 187 ntBASIC0.68□□□□□ -2.3
CDH12P55289 MIR96-201ENST00000362288 78 ntBASIC0.67□□□□□ -2.3
CDH12P55289 Y_RNA.173-201ENST00000363776 113 ntBASIC0.67□□□□□ -2.3
CDH12P55289 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
CDH12P55289 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
CDH12P55289 MIR635-201ENST00000384830 98 ntBASIC0.67□□□□□ -2.3
CDH12P55289 RNA5SP102-201ENST00000516865 106 ntBASIC0.67□□□□□ -2.3
CDH12P55289 Y_RNA.4-201ENST00000362333 112 ntBASIC0.66□□□□□ -2.3
CDH12P55289 RNU6-170P-201ENST00000362832 104 ntBASIC0.66□□□□□ -2.3
CDH12P55289 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
CDH12P55289 SNORD63B-201ENST00000411005 70 ntBASIC0.66□□□□□ -2.3
CDH12P55289 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
CDH12P55289 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.66□□□□□ -2.3
CDH12P55289 AC096720.1-201ENST00000604441 183 ntBASIC0.66□□□□□ -2.3
CDH12P55289 RNU7-10P-201ENST00000607194 63 ntBASIC0.66□□□□□ -2.3
CDH12P55289 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
CDH12P55289 SNORD18A-201ENST00000363753 72 ntBASIC0.65□□□□□ -2.31
CDH12P55289 RNU6-1163P-201ENST00000364516 107 ntBASIC0.65□□□□□ -2.31
CDH12P55289 RNU7-106P-201ENST00000459514 67 ntBASIC0.65□□□□□ -2.31
CDH12P55289 RNU6-904P-201ENST00000516206 101 ntBASIC0.65□□□□□ -2.31
CDH12P55289 RNU6-919P-201ENST00000516731 104 ntBASIC0.65□□□□□ -2.31
CDH12P55289 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms