Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AP001362.1-201ENST00000625165 124 ntBASIC1.05□□□□□ -2.24
COPB1P53618 U6.109-201ENST00000636749 87 ntBASIC1.05□□□□□ -2.24
COPB1P53618 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
COPB1P53618 MIR1-1-201ENST00000362147 71 ntBASIC1.04□□□□□ -2.24
COPB1P53618 Y_RNA.119-201ENST00000363301 96 ntBASIC1.04□□□□□ -2.24
COPB1P53618 RNU6-832P-201ENST00000363319 107 ntBASIC1.04□□□□□ -2.24
COPB1P53618 Y_RNA.247-201ENST00000364500 92 ntBASIC1.04□□□□□ -2.24
COPB1P53618 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COPB1P53618 MIR1302-5-201ENST00000408164 150 ntBASIC1.04□□□□□ -2.24
COPB1P53618 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
COPB1P53618 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
COPB1P53618 RNU4-83P-201ENST00000410863 133 ntBASIC1.04□□□□□ -2.24
COPB1P53618 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.04□□□□□ -2.24
COPB1P53618 RNU7-56P-201ENST00000458744 62 ntBASIC1.04□□□□□ -2.24
COPB1P53618 SNORA25.16-201ENST00000516741 121 ntBASIC1.04□□□□□ -2.24
COPB1P53618 RNU6-537P-201ENST00000517277 103 ntBASIC1.04□□□□□ -2.24
COPB1P53618 SNORD92-201ENST00000585078 85 ntBASIC1.04□□□□□ -2.24
COPB1P53618 AL442128.1-201ENST00000615151 90 ntBASIC1.04□□□□□ -2.24
COPB1P53618 AL512310.12-203ENST00000640543 90 ntBASIC1.04□□□□□ -2.24
COPB1P53618 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
COPB1P53618 Y_RNA.42-201ENST00000362660 108 ntBASIC1.03□□□□□ -2.24
COPB1P53618 SNORA19.1-201ENST00000410656 129 ntBASIC1.03□□□□□ -2.24
COPB1P53618 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
COPB1P53618 RNU6-904P-201ENST00000516206 101 ntBASIC1.03□□□□□ -2.24
COPB1P53618 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
COPB1P53618 RNU7-156P-201ENST00000517214 74 ntBASIC1.03□□□□□ -2.24
COPB1P53618 MIR6082-201ENST00000613604 109 ntBASIC1.03□□□□□ -2.24
COPB1P53618 Y_RNA.13-201ENST00000362403 112 ntBASIC1.02□□□□□ -2.25
COPB1P53618 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
COPB1P53618 MIR938-201ENST00000401216 83 ntBASIC1.02□□□□□ -2.25
COPB1P53618 AC067940.1-201ENST00000458411 300 ntBASIC1.02□□□□□ -2.25
COPB1P53618 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
COPB1P53618 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-766P-201ENST00000362478 107 ntBASIC1.01□□□□□ -2.25
COPB1P53618 Y_RNA.36-201ENST00000362602 112 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-403P-201ENST00000363163 104 ntBASIC1.01□□□□□ -2.25
COPB1P53618 SNORD114-26-201ENST00000363543 72 ntBASIC1.01□□□□□ -2.25
COPB1P53618 SNORD38.1-201ENST00000363863 68 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-153P-201ENST00000364422 104 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
COPB1P53618 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-147P-201ENST00000383983 107 ntBASIC1.01□□□□□ -2.25
COPB1P53618 AL031737.1-201ENST00000450125 223 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-977P-201ENST00000516411 103 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-531P-201ENST00000516694 104 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-765P-201ENST00000516916 99 ntBASIC1.01□□□□□ -2.25
COPB1P53618 AC141557.1-201ENST00000540982 400 ntBASIC1.01□□□□□ -2.25
COPB1P53618 RNU6-756P-201ENST00000383997 107 ntBASIC1□□□□□ -2.25
COPB1P53618 SNORA51.5-201ENST00000384126 131 ntBASIC1□□□□□ -2.25
COPB1P53618 Y_RNA.540-201ENST00000384638 111 ntBASIC1□□□□□ -2.25
COPB1P53618 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
COPB1P53618 RNU7-102P-201ENST00000458948 62 ntBASIC1□□□□□ -2.25
COPB1P53618 RNU6-1194P-201ENST00000516208 104 ntBASIC1□□□□□ -2.25
COPB1P53618 DEFB131E-201ENST00000532329 154 ntBASIC1□□□□□ -2.25
COPB1P53618 AC090897.1-201ENST00000580909 226 ntBASIC1□□□□□ -2.25
COPB1P53618 AC008608.1-201ENST00000603910 127 ntBASIC1□□□□□ -2.25
COPB1P53618 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
COPB1P53618 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
COPB1P53618 MIR450A1-201ENST00000362262 91 ntBASIC0.99□□□□□ -2.25
COPB1P53618 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
COPB1P53618 RNU6-1113P-201ENST00000384348 107 ntBASIC0.99□□□□□ -2.25
COPB1P53618 MIR590-201ENST00000385008 97 ntBASIC0.99□□□□□ -2.25
COPB1P53618 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
COPB1P53618 RNA5SP255-201ENST00000516370 107 ntBASIC0.99□□□□□ -2.25
COPB1P53618 MIR4500-201ENST00000579472 76 ntBASIC0.99□□□□□ -2.25
COPB1P53618 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.99□□□□□ -2.25
COPB1P53618 RNU4-36P-201ENST00000364294 144 ntBASIC0.98□□□□□ -2.25
COPB1P53618 RNU6-1335P-201ENST00000365426 107 ntBASIC0.98□□□□□ -2.25
COPB1P53618 RNU6-364P-201ENST00000384387 107 ntBASIC0.98□□□□□ -2.25
COPB1P53618 SNORA72.6-201ENST00000384520 129 ntBASIC0.98□□□□□ -2.25
COPB1P53618 MIR520F-201ENST00000384824 87 ntBASIC0.98□□□□□ -2.25
COPB1P53618 Y_RNA.601-201ENST00000410500 113 ntBASIC0.98□□□□□ -2.25
COPB1P53618 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
COPB1P53618 AC013244.2-201ENST00000603396 103 ntBASIC0.98□□□□□ -2.25
COPB1P53618 AL136317.1-201ENST00000612653 226 ntBASIC0.98□□□□□ -2.25
COPB1P53618 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
COPB1P53618 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.98□□□□□ -2.25
COPB1P53618 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
COPB1P53618 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
COPB1P53618 Y_RNA.10-201ENST00000362371 110 ntBASIC0.96□□□□□ -2.26
COPB1P53618 Y_RNA.173-201ENST00000363776 113 ntBASIC0.96□□□□□ -2.26
COPB1P53618 RNU6-1163P-201ENST00000364516 107 ntBASIC0.96□□□□□ -2.26
COPB1P53618 SNORD38.2-201ENST00000384470 69 ntBASIC0.96□□□□□ -2.26
COPB1P53618 SNORD105-201ENST00000386910 85 ntBASIC0.96□□□□□ -2.26
COPB1P53618 RNU1-119P-201ENST00000391122 165 ntBASIC0.96□□□□□ -2.26
COPB1P53618 MIR548G-201ENST00000408442 89 ntBASIC0.96□□□□□ -2.26
COPB1P53618 SCARNA23-201ENST00000516060 130 ntBASIC0.96□□□□□ -2.26
COPB1P53618 AC096720.1-201ENST00000604441 183 ntBASIC0.96□□□□□ -2.26
COPB1P53618 Y_RNA.818-201ENST00000618813 71 ntBASIC0.96□□□□□ -2.26
COPB1P53618 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
COPB1P53618 AC091304.10-201ENST00000641554 121 ntBASIC0.96□□□□□ -2.26
COPB1P53618 RNU6-109P-201ENST00000516364 107 ntBASIC0.95□□□□□ -2.26
COPB1P53618 RNU6-184P-201ENST00000516514 107 ntBASIC0.95□□□□□ -2.26
COPB1P53618 AP003327.1-201ENST00000529684 127 ntBASIC0.95□□□□□ -2.26
COPB1P53618 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
COPB1P53618 RNU6-90P-201ENST00000606352 106 ntBASIC0.95□□□□□ -2.26
COPB1P53618 PVT1_3.1-201ENST00000620853 95 ntBASIC0.95□□□□□ -2.26
COPB1P53618 RNU6-571P-201ENST00000384128 107 ntBASIC0.94□□□□□ -2.26
COPB1P53618 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
COPB1P53618 MIR520H-201ENST00000385126 88 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms