Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC015818.7-201ENST00000428754 109 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 AC087499.7-201ENST00000441958 109 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 SNORA25.16-201ENST00000516741 121 ntBASIC1.56□□□□□ -2.16
SLC6A11P48066 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
SLC6A11P48066 SNORD113.3-201ENST00000364630 78 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 RNU1-36P-201ENST00000365130 165 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 Y_RNA.363-201ENST00000365529 113 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 SNORD116-22-201ENST00000384430 92 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 RNU6-910P-201ENST00000390844 107 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 RNU6-402P-201ENST00000410678 103 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 MIR4491-201ENST00000581087 68 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 IGLL4P-201ENST00000614590 133 ntBASIC1.55□□□□□ -2.16
SLC6A11P48066 RNY1P1-201ENST00000364372 112 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 RNU6-820P-201ENST00000384273 107 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 AL591704.2-201ENST00000421658 181 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 RNU7-185P-201ENST00000459215 60 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 AC025521.1-201ENST00000621624 286 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
SLC6A11P48066 ZNF209P-201ENST00000593450 2304 ntBASIC1.54□□□□□ -2.16
SLC6A11P48066 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
SLC6A11P48066 Y_RNA.57-201ENST00000362806 113 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 Y_RNA.609-201ENST00000410669 89 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 RNU4-83P-201ENST00000410863 133 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 SNRPGP12-201ENST00000449481 213 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 RNU6-850P-201ENST00000516934 103 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 RNU1-92P-201ENST00000517017 135 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 AC036111.3-201ENST00000526389 112 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 AL513043.2-201ENST00000573941 143 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 MIR4771-2-201ENST00000577758 74 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 MIR4771-1-201ENST00000582617 74 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 AC020891.4-201ENST00000605745 93 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.53□□□□□ -2.16
SLC6A11P48066 RNU4-58P-201ENST00000363192 141 ntBASIC1.52□□□□□ -2.17
SLC6A11P48066 RNA5SP173-201ENST00000364857 136 ntBASIC1.52□□□□□ -2.17
SLC6A11P48066 RNU6-934P-201ENST00000365154 107 ntBASIC1.52□□□□□ -2.17
SLC6A11P48066 RNY1P4-201ENST00000384595 115 ntBASIC1.52□□□□□ -2.17
SLC6A11P48066 Y_RNA.588-201ENST00000391254 102 ntBASIC1.52□□□□□ -2.17
SLC6A11P48066 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
SLC6A11P48066 RNU6-994P-201ENST00000410507 111 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 MIR4668-201ENST00000582284 70 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 MIR8066-201ENST00000617280 78 ntBASIC1.51□□□□□ -2.17
SLC6A11P48066 Y_RNA.73-201ENST00000362910 113 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 RNU6-571P-201ENST00000384128 107 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 SNORA80D-201ENST00000384488 135 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 RNU7-21P-201ENST00000459430 62 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 RNU6-267P-201ENST00000516714 103 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 AC008163.1-202ENST00000636004 2889 ntBASIC1.5□□□□□ -2.17
SLC6A11P48066 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
SLC6A11P48066 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 SNORD111-201ENST00000408139 94 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 MIR1276-201ENST00000408707 83 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 AC022137.1-201ENST00000483735 151 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 RNU7-40P-201ENST00000516397 64 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 AC106800.4-201ENST00000614905 153 ntBASIC1.49□□□□□ -2.17
SLC6A11P48066 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 Y_RNA.13-201ENST00000362403 112 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 RNU6-675P-201ENST00000384236 104 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 RNU6-1152P-201ENST00000384576 107 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 RNU6-592P-201ENST00000411333 103 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 RNU7-90P-201ENST00000459216 62 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
SLC6A11P48066 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SLC6A11P48066 Y_RNA.191-201ENST00000363972 113 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 RNU6-219P-201ENST00000364728 107 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 RNU6-497P-201ENST00000365316 104 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 RNU6-573P-201ENST00000383938 106 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 SNORA70.22-201ENST00000517160 124 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
SLC6A11P48066 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
SLC6A11P48066 Y_RNA.620-201ENST00000411009 88 ntBASIC1.46□□□□□ -2.18
SLC6A11P48066 AL078603.1-201ENST00000603824 313 ntBASIC1.46□□□□□ -2.18
SLC6A11P48066 MIR6082-201ENST00000613604 109 ntBASIC1.46□□□□□ -2.18
SLC6A11P48066 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SLC6A11P48066 MIR516A2-201ENST00000384888 90 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 MIR516A1-201ENST00000385033 90 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 MIR125B2-201ENST00000385128 89 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 RNU6-519P-201ENST00000410590 108 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 RPS26P5-201ENST00000418544 335 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 RNU6-1194P-201ENST00000516208 104 ntBASIC1.45□□□□□ -2.18
SLC6A11P48066 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SLC6A11P48066 RNU6-42P-201ENST00000384165 107 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU6-242P-201ENST00000384359 107 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU6-364P-201ENST00000384387 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms