Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-679P-201ENST00000391003 106 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 AC002350.1-201ENST00000490759 375 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 Y_RNA.697-201ENST00000516776 113 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
HLA-DOBP13765 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 MIR337-201ENST00000362281 93 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 U8.6-201ENST00000364939 135 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 AL353813.1-201ENST00000440700 253 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
HLA-DOBP13765 MIR5009-201ENST00000578736 100 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 MIR4500-201ENST00000579472 76 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 MIR3612-201ENST00000579753 87 ntBASIC0.69□□□□□ -2.3
HLA-DOBP13765 Y_RNA.4-201ENST00000362333 112 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 Y_RNA.56-201ENST00000362798 112 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 Y_RNA.116-201ENST00000363292 103 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 Y_RNA.174-201ENST00000363781 105 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 Y_RNA.323-201ENST00000365157 109 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 RNA5SP117-201ENST00000365294 118 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 MIR1276-201ENST00000408707 83 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 MIR4694-201ENST00000578534 80 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 RNU7-10P-201ENST00000607194 63 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 MIR6129-201ENST00000616087 109 ntBASIC0.68□□□□□ -2.3
HLA-DOBP13765 Y_RNA.164-201ENST00000363709 102 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 SNORD38.1-201ENST00000363863 68 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-1107P-201ENST00000364817 104 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 Y_RNA.377-201ENST00000365644 108 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-1201P-201ENST00000384227 107 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-291P-201ENST00000384720 107 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-535P-201ENST00000384722 107 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 MIR548H5-201ENST00000580314 60 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 MIR8070-201ENST00000616510 88 ntBASIC0.67□□□□□ -2.3
HLA-DOBP13765 RNU6-571P-201ENST00000384128 107 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 MIR520E-201ENST00000384867 87 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 RNU6-589P-201ENST00000516485 107 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 RNU6-1006P-201ENST00000516998 103 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 AL442128.1-201ENST00000615151 90 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 uc_338.16-201ENST00000621804 95 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
HLA-DOBP13765 RNU6-1290P-201ENST00000362957 109 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 RNU6-1014P-201ENST00000383940 103 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 SNRPGP12-201ENST00000449481 213 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 AC096720.1-201ENST00000604441 183 ntBASIC0.65□□□□□ -2.31
HLA-DOBP13765 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 RNY3P2-201ENST00000362918 102 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 MIR577-201ENST00000385196 96 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 BX276092.1-201ENST00000427368 251 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 Y_RNA.709-201ENST00000516952 92 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 MTND5P40-201ENST00000559945 246 ntBASIC0.64□□□□□ -2.31
HLA-DOBP13765 Y_RNA.32-201ENST00000362589 110 ntBASIC0.63□□□□□ -2.31
HLA-DOBP13765 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
HLA-DOBP13765 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
HLA-DOBP13765 AC138869.1-201ENST00000568623 124 ntBASIC0.63□□□□□ -2.31
HLA-DOBP13765 RNU6-832P-201ENST00000363319 107 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 RNU6-1099P-201ENST00000363533 107 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 RNU6-1325P-201ENST00000364905 105 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 MIR635-201ENST00000384830 98 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 MIR548G-201ENST00000408442 89 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 AC141557.1-201ENST00000540982 400 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 RNU6-90P-201ENST00000606352 106 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
HLA-DOBP13765 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
HLA-DOBP13765 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.62□□□□□ -2.31
HLA-DOBP13765 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 RNU6-170P-201ENST00000362832 104 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 Y_RNA.247-201ENST00000364500 92 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 MIR1302-5-201ENST00000408164 150 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 SPINT5P-201ENST00000448174 155 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 RPS29P1-201ENST00000465274 159 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 RNU6-850P-201ENST00000516934 103 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 MIR6504-201ENST00000613520 61 ntBASIC0.61□□□□□ -2.31
HLA-DOBP13765 Y_RNA.163-201ENST00000363702 113 ntBASIC0.6□□□□□ -2.31
HLA-DOBP13765 RNU4-36P-201ENST00000364294 144 ntBASIC0.6□□□□□ -2.31
HLA-DOBP13765 MIR519A1-201ENST00000385257 85 ntBASIC0.6□□□□□ -2.31
HLA-DOBP13765 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
HLA-DOBP13765 AC244505.6-201ENST00000452829 130 ntBASIC0.6□□□□□ -2.31
HLA-DOBP13765 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.6□□□□□ -2.31
HLA-DOBP13765 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
HLA-DOBP13765 Y_RNA.78-201ENST00000362970 110 ntBASIC0.59□□□□□ -2.31
HLA-DOBP13765 Y_RNA.173-201ENST00000363776 113 ntBASIC0.59□□□□□ -2.31
HLA-DOBP13765 RNA5SP245-201ENST00000364239 121 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 259.6 ms