Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 RNU6-1163P-201ENST00000364516 107 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 RNU6-1134P-201ENST00000365156 101 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 Y_RNA.388-201ENST00000383919 113 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 MIR563-201ENST00000385080 79 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 RNU6-972P-201ENST00000391208 107 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 RNU6-887P-201ENST00000410660 100 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 AC062037.1-201ENST00000605302 128 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 SEPT14P17-201ENST00000617978 177 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 MIR6740-201ENST00000618268 113 ntBASIC1.32□□□□□ -2.2
TOP3BO95985 RNU6-813P-201ENST00000384691 107 ntBASIC1.31□□□□□ -2.2
TOP3BO95985 MT-TN-201ENST00000387400 73 ntBASIC1.31□□□□□ -2.2
TOP3BO95985 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
TOP3BO95985 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.31□□□□□ -2.2
TOP3BO95985 MIR6516-201ENST00000630554 81 ntBASIC1.31□□□□□ -2.2
TOP3BO95985 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TOP3BO95985 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 Y_RNA.190-201ENST00000363964 101 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 MIR548G-201ENST00000408442 89 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 RNU6-1165P-201ENST00000410119 107 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 Y_RNA.593-201ENST00000410292 98 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 RNU6-86P-201ENST00000606534 107 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
TOP3BO95985 MIR30D-201ENST00000362283 70 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 Y_RNA.17-201ENST00000362433 111 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 MIR450A2-201ENST00000385022 100 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 U8.15-201ENST00000390947 134 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 RN7SKP12-201ENST00000516275 143 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 RNU6-90P-201ENST00000606352 106 ntBASIC1.29□□□□□ -2.2
TOP3BO95985 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
TOP3BO95985 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 RNU6-1244P-201ENST00000363614 108 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 Y_RNA.168-201ENST00000363740 102 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 RNY1P2-201ENST00000364820 117 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 SNORD38.2-201ENST00000384470 69 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 SPINT5P-201ENST00000448174 155 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.28□□□□□ -2.2
TOP3BO95985 AC103810.7-201ENST00000607821 91 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 uc_338.6-201ENST00000613544 171 ntBASIC1.28□□□□□ -2.2
TOP3BO95985 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
TOP3BO95985 MIR494-201ENST00000349529 81 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 SNORD116-10-201ENST00000363791 102 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 SNORD58A-201ENST00000383875 65 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 RNU6-820P-201ENST00000384273 107 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 Y_RNA.567-201ENST00000384736 106 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 RNA5SP95-201ENST00000410319 137 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 MTND5P40-201ENST00000559945 246 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 AC138749.4-201ENST00000563970 127 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
TOP3BO95985 HSBP1P2-201ENST00000299671 229 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 Y_RNA.173-201ENST00000363776 113 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 MT-TF-201ENST00000387314 71 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 SNORA40.6-201ENST00000391153 128 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 SNORA31.2-201ENST00000516019 134 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.26□□□□□ -2.21
TOP3BO95985 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
TOP3BO95985 RNU6-580P-201ENST00000365159 107 ntBASIC1.25□□□□□ -2.21
TOP3BO95985 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TOP3BO95985 AC090897.1-201ENST00000580909 226 ntBASIC1.25□□□□□ -2.21
TOP3BO95985 U6.109-201ENST00000636749 87 ntBASIC1.25□□□□□ -2.21
TOP3BO95985 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
TOP3BO95985 RNA5SP133-201ENST00000363368 119 ntBASIC1.24□□□□□ -2.21
TOP3BO95985 RNA5SP173-201ENST00000364857 136 ntBASIC1.24□□□□□ -2.21
TOP3BO95985 SNORD116-22-201ENST00000384430 92 ntBASIC1.24□□□□□ -2.21
TOP3BO95985 MIR216A-201ENST00000385063 110 ntBASIC1.24□□□□□ -2.21
TOP3BO95985 RNU6-402P-201ENST00000410678 103 ntBASIC1.24□□□□□ -2.21
TOP3BO95985 RNU6-675P-201ENST00000384236 104 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 RNU6-1152P-201ENST00000384576 107 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 RNU6-592P-201ENST00000411333 103 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 MIR5000-201ENST00000577717 103 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 MIR4500-201ENST00000579472 76 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 AC020891.4-201ENST00000605745 93 ntBASIC1.23□□□□□ -2.21
TOP3BO95985 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 RNY1P1-201ENST00000364372 112 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 RNU6-219P-201ENST00000364728 107 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 RNU6-573P-201ENST00000383938 106 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 SNRPGP12-201ENST00000449481 213 ntBASIC1.22□□□□□ -2.21
TOP3BO95985 MIR18B-201ENST00000454574 71 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms