Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 SNORD49B-201ENST00000365172 72 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 SNORD77B-201ENST00000391112 67 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 SNORD63B-201ENST00000411005 70 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 RNU7-195P-201ENST00000458793 62 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 uc_338.36-201ENST00000622331 158 ntBASIC-0.52□□□□□ -2.49
CLDN3O15551 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.52□□□□□ -2.49
CLDN3O15551 RNA5SP98-201ENST00000363158 137 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 SNORD27-201ENST00000363981 72 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 SNORD58.1-201ENST00000391313 66 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 MIR1912-201ENST00000410389 80 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 RNU7-2P-201ENST00000516096 62 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 MIR3149-201ENST00000584629 83 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 AP001180.6-201ENST00000584918 159 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 AC009779.6-201ENST00000603972 165 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
CLDN3O15551 RNU1-141P-201ENST00000364623 158 ntBASIC-0.54□□□□□ -2.5
CLDN3O15551 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.54□□□□□ -2.5
CLDN3O15551 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
CLDN3O15551 RNA5SP300-201ENST00000391197 107 ntBASIC-0.54□□□□□ -2.5
CLDN3O15551 SNORA75.5-201ENST00000391291 81 ntBASIC-0.54□□□□□ -2.5
CLDN3O15551 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.54□□□□□ -2.5
CLDN3O15551 RNU6-170P-201ENST00000362832 104 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 RNU6-524P-201ENST00000384270 107 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 MTND5P40-201ENST00000559945 246 ntBASIC-0.55□□□□□ -2.5
CLDN3O15551 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 AC107027.2-201ENST00000512197 115 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 AL117187.1-201ENST00000555482 181 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 MIR6844-201ENST00000637122 62 ntBASIC-0.56□□□□□ -2.5
CLDN3O15551 SNORD115-35-201ENST00000365122 82 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 RNU6-918P-201ENST00000391219 106 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 RNU7-106P-201ENST00000459514 67 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 MIR4636-201ENST00000582271 80 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 MIR376B-201ENST00000614515 100 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 RN7SL660P-201ENST00000614852 299 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
CLDN3O15551 MIR101-1-201ENST00000362265 75 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 RNU6-571P-201ENST00000384128 107 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 RNU6-616P-201ENST00000384353 107 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 RNU6-588P-201ENST00000410281 105 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 MIR4263-201ENST00000584745 83 ntBASIC-0.58□□□□□ -2.5
CLDN3O15551 SNORD18B-201ENST00000365659 72 ntBASIC-0.59□□□□□ -2.5
CLDN3O15551 MIR4493-201ENST00000584016 73 ntBASIC-0.59□□□□□ -2.5
CLDN3O15551 MIR6507-201ENST00000613630 70 ntBASIC-0.59□□□□□ -2.5
CLDN3O15551 uc_338.10-201ENST00000621872 182 ntBASIC-0.59□□□□□ -2.5
CLDN3O15551 MIR655-201ENST00000362159 97 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNU6-508P-201ENST00000363231 103 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNU6-312P-201ENST00000364629 107 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 U8.6-201ENST00000364939 135 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNU6-811P-201ENST00000384069 107 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 AC244250.2-201ENST00000418731 148 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 MIR3646-201ENST00000578301 84 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 MIR4473-201ENST00000583731 91 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 AC008737.2-201ENST00000599446 118 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 AC069503.3-201ENST00000618674 145 ntBASIC-0.6□□□□□ -2.51
CLDN3O15551 RNU6-309P-201ENST00000364573 106 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR606-201ENST00000384851 96 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR617-201ENST00000385030 97 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR519E-201ENST00000385075 84 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 RNU4-71P-201ENST00000516258 113 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 RNU6-850P-201ENST00000516934 103 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR548AG2-201ENST00000581228 64 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 MIR4788-201ENST00000639104 80 ntBASIC-0.61□□□□□ -2.51
CLDN3O15551 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 AC093423.1-201ENST00000440817 142 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.62□□□□□ -2.51
CLDN3O15551 RNY4P20-201ENST00000516678 93 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 RNU7-188P-201ENST00000517063 64 ntBASIC-0.62□□□□□ -2.51
CLDN3O15551 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.63□□□□□ -2.51
CLDN3O15551 SNORD115-44-201ENST00000365391 82 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms