Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-816P-201ENST00000390914 107 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1268P-201ENST00000391214 107 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1239P-201ENST00000391310 107 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 MIR938-201ENST00000401216 83 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 AL353813.1-201ENST00000440700 253 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 AC138749.4-201ENST00000563970 127 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 AC015818.7-201ENST00000428754 109 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 AC087499.7-201ENST00000441958 109 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 RNU7-56P-201ENST00000458744 62 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 AC105081.1-201ENST00000617727 106 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 MIR6513-201ENST00000621188 64 ntBASIC1.31□□□□□ -2.2
CCDC85CA6NKD9 MIR330-201ENST00000362196 94 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 RNU6-215P-201ENST00000365169 102 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 RNU6-409P-201ENST00000384114 104 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 MIR936-201ENST00000401264 98 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 RNU4-83P-201ENST00000410863 133 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 RNU6-977P-201ENST00000516411 103 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 AC068339.1-201ENST00000526965 141 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 MIR4714-201ENST00000580728 77 ntBASIC1.3□□□□□ -2.2
CCDC85CA6NKD9 SNORA63.5-201ENST00000363548 123 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 RNU6-679P-201ENST00000391003 106 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.709-201ENST00000516952 92 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 MIR5009-201ENST00000578736 100 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 AC025627.3-201ENST00000582078 182 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 MIR6082-201ENST00000613604 109 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
CCDC85CA6NKD9 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 VTRNA1-3-201ENST00000365645 89 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 RNU6-733P-201ENST00000410759 104 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 RNU7-156P-201ENST00000517214 74 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 MIR376B-201ENST00000614515 100 ntBASIC1.28□□□□□ -2.2
CCDC85CA6NKD9 RNA5SP133-201ENST00000363368 119 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 RNU6-865P-201ENST00000364772 107 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1107P-201ENST00000364817 104 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1325P-201ENST00000364905 105 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 SNORD89-201ENST00000390981 114 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 PDCD5P2-201ENST00000507570 312 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 AP003327.1-201ENST00000529684 127 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 U6.109-201ENST00000636749 87 ntBASIC1.27□□□□□ -2.21
CCDC85CA6NKD9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 MIR520F-201ENST00000384824 87 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 RNU7-102P-201ENST00000458948 62 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 MIR3973-201ENST00000579824 107 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 MIR4661-201ENST00000582720 75 ntBASIC1.26□□□□□ -2.21
CCDC85CA6NKD9 HSBP1P2-201ENST00000299671 229 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 RNU4-58P-201ENST00000363192 141 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 RNU6-364P-201ENST00000384387 107 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 RNU1-119P-201ENST00000391122 165 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 SNORA7.5-201ENST00000410672 110 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 MIR4694-201ENST00000578534 80 ntBASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CCDC85CA6NKD9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1014P-201ENST00000383940 103 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 MIR34C-201ENST00000384831 77 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 SNORA25.16-201ENST00000516741 121 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC85CA6NKD9 RNU6-403P-201ENST00000363163 104 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 MIR605-201ENST00000385078 83 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 RNY4P18-201ENST00000391107 89 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 MIR1265-201ENST00000408444 86 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 RNU6-919P-201ENST00000516731 104 ntBASIC1.23□□□□□ -2.21
CCDC85CA6NKD9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.22□□□□□ -2.21
CCDC85CA6NKD9 SNORD20-201ENST00000384550 80 ntBASIC1.22□□□□□ -2.21
CCDC85CA6NKD9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC85CA6NKD9 AC008608.1-201ENST00000603910 127 ntBASIC1.22□□□□□ -2.21
CCDC85CA6NKD9 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
CCDC85CA6NKD9 RNU6-755P-201ENST00000364400 103 ntBASIC1.21□□□□□ -2.22
CCDC85CA6NKD9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC85CA6NKD9 RNU6-531P-201ENST00000516694 104 ntBASIC1.21□□□□□ -2.22
CCDC85CA6NKD9 RNY3P2-201ENST00000362918 102 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 SNORD38.1-201ENST00000363863 68 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 SNORD38.2-201ENST00000384470 69 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 SNORA72.6-201ENST00000384520 129 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 MIR520H-201ENST00000385126 88 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 MIR577-201ENST00000385196 96 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 RNA5SP285-201ENST00000516619 119 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 AL442128.1-201ENST00000615151 90 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 AL512310.12-203ENST00000640543 90 ntBASIC1.2□□□□□ -2.22
CCDC85CA6NKD9 Y_RNA.78-201ENST00000362970 110 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms