Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC011195.1-201ENST00000578177 177 ntBASIC0.79□□□□□ -2.28
IGHV4-28A0A0C4DH34 uc_338.28-201ENST00000612082 187 ntBASIC0.79□□□□□ -2.28
IGHV4-28A0A0C4DH34 AL442128.1-201ENST00000615151 90 ntBASIC0.79□□□□□ -2.28
IGHV4-28A0A0C4DH34 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
IGHV4-28A0A0C4DH34 RNY3P2-201ENST00000362918 102 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 Y_RNA.163-201ENST00000363702 113 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 SNORD114-27-201ENST00000363766 70 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 SNORD38.2-201ENST00000384470 69 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 MIR1285-1-201ENST00000408593 84 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 RNA5SP247-201ENST00000411181 105 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 BX276092.1-201ENST00000427368 251 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 AP003327.1-201ENST00000529684 127 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 AC141557.1-201ENST00000540982 400 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
IGHV4-28A0A0C4DH34 RNU6-832P-201ENST00000363319 107 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-1099P-201ENST00000363533 107 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORD38.1-201ENST00000363863 68 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-106P-201ENST00000384405 107 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.536-201ENST00000384621 113 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-291P-201ENST00000384720 107 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR499A-201ENST00000384903 122 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR1302-5-201ENST00000408164 150 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-554P-201ENST00000410466 106 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 AL035461.1-201ENST00000421490 332 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 MTND5P40-201ENST00000559945 246 ntBASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
IGHV4-28A0A0C4DH34 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORA63.4-201ENST00000362763 126 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.377-201ENST00000365644 108 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-535P-201ENST00000384722 107 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORD100-201ENST00000408573 76 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORA19.1-201ENST00000410656 129 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 SPINT5P-201ENST00000448174 155 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 AC002350.1-201ENST00000490759 375 ntBASIC0.76□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.226-201ENST00000364337 114 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-44P-201ENST00000384045 107 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR548G-201ENST00000408442 89 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR3613-201ENST00000579844 87 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 AC096720.1-201ENST00000604441 183 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORD114-21-201ENST00000606412 72 ntBASIC0.75□□□□□ -2.29
IGHV4-28A0A0C4DH34 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.32-201ENST00000362589 110 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU4-36P-201ENST00000364294 144 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNA5SP117-201ENST00000365294 118 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR1287-201ENST00000408492 90 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNRPGP12-201ENST00000449481 213 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.659-201ENST00000515994 113 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-90P-201ENST00000606352 106 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR6504-201ENST00000613520 61 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.56-201ENST00000362798 112 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.191-201ENST00000363972 113 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.224-201ENST00000364308 111 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORA51.5-201ENST00000384126 131 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-571P-201ENST00000384128 107 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNA5SP222-201ENST00000411039 105 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 SNORA31.14-201ENST00000516728 116 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-850P-201ENST00000516934 103 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR548H5-201ENST00000580314 60 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 AC103810.9-201ENST00000606688 112 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 uc_338.16-201ENST00000621804 95 ntBASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR450A1-201ENST00000362262 91 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 MIR96-201ENST00000362288 78 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNA5SP245-201ENST00000364239 121 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU4-38P-201ENST00000364472 129 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-756P-201ENST00000383997 107 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 RNU6-904P-201ENST00000516206 101 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 AC091304.10-201ENST00000641554 121 ntBASIC0.72□□□□□ -2.29
IGHV4-28A0A0C4DH34 Y_RNA.10-201ENST00000362371 110 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.78-201ENST00000362970 110 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-755P-201ENST00000364400 103 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 SNORD114-22-201ENST00000365423 72 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR635-201ENST00000384830 98 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR590-201ENST00000385008 97 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR644A-201ENST00000385262 94 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 AL031737.1-201ENST00000450125 223 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 TRAJ51-201ENST00000504127 63 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR4452-201ENST00000583004 71 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU7-10P-201ENST00000607194 63 ntBASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
IGHV4-28A0A0C4DH34 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR18A-201ENST00000362310 71 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-170P-201ENST00000362832 104 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.173-201ENST00000363776 113 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.567-201ENST00000384736 106 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms