Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MIR548O2-201ENST00000616090 70 ntBASIC-1.79□□□□□ -2.7
TRAV4A0A0B4J268 U6.100-201ENST00000636230 99 ntBASIC-1.79□□□□□ -2.7
TRAV4A0A0B4J268 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 SNORD114-4-201ENST00000363962 75 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 RNU6-978P-201ENST00000364371 103 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 AL442663.2-201ENST00000554385 511 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 U4.5-201ENST00000617137 123 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 AC112487.2-201ENST00000637950 304 ntBASIC-1.8□□□□□ -2.7
TRAV4A0A0B4J268 SNORD27-201ENST00000363981 72 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 RNU6-243P-201ENST00000391140 107 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 MIR548E-201ENST00000408287 88 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 AC002553.4-201ENST00000616896 331 ntBASIC-1.81□□□□□ -2.7
TRAV4A0A0B4J268 UBE2WP1-201ENST00000362030 340 ntBASIC-1.82□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.82□□□□□ -2.7
TRAV4A0A0B4J268 RNU6-706P-201ENST00000517229 104 ntBASIC-1.82□□□□□ -2.7
TRAV4A0A0B4J268 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.82□□□□□ -2.7
TRAV4A0A0B4J268 MIR198-201ENST00000637333 62 ntBASIC-1.82□□□□□ -2.7
TRAV4A0A0B4J268 RNU6-845P-201ENST00000362578 103 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 MIR582-201ENST00000365731 98 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 MTND1P29-201ENST00000448112 647 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 AC113139.1-201ENST00000605049 239 ntBASIC-1.83□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.84□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.84□□□□□ -2.7
TRAV4A0A0B4J268 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.84□□□□□ -2.7
TRAV4A0A0B4J268 AC104985.2-201ENST00000620598 500 ntBASIC-1.84□□□□□ -2.7
TRAV4A0A0B4J268 SNORD114-17-201ENST00000364699 75 ntBASIC-1.85□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.85□□□□□ -2.71
TRAV4A0A0B4J268 SNORD38.2-201ENST00000384470 69 ntBASIC-1.85□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-592P-201ENST00000411333 103 ntBASIC-1.85□□□□□ -2.71
TRAV4A0A0B4J268 AL161932.1-201ENST00000437408 146 ntBASIC-1.85□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 MIR1277-201ENST00000408536 78 ntBASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-588P-201ENST00000410281 105 ntBASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 RNU7-164P-201ENST00000459221 62 ntBASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 AC097510.1-201ENST00000510945 133 ntBASIC-1.86□□□□□ -2.71
TRAV4A0A0B4J268 SNORD36A-201ENST00000362874 73 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-762P-201ENST00000517107 102 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 AC138907.4-201ENST00000570107 226 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 MIR3908-201ENST00000579798 126 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 AC021443.1-201ENST00000604478 211 ntBASIC-1.87□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.88□□□□□ -2.71
TRAV4A0A0B4J268 MIR601-201ENST00000385256 79 ntBASIC-1.88□□□□□ -2.71
TRAV4A0A0B4J268 MIR6773-201ENST00000612812 74 ntBASIC-1.88□□□□□ -2.71
TRAV4A0A0B4J268 AC084781.2-201ENST00000615568 161 ntBASIC-1.88□□□□□ -2.71
TRAV4A0A0B4J268 MTND4LP32-201ENST00000636111 270 ntBASIC-1.88□□□□□ -2.71
TRAV4A0A0B4J268 SNORA62.4-201ENST00000365504 151 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 SNORA63.7-201ENST00000365579 123 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 SNORD116-1-201ENST00000384335 95 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-616P-201ENST00000384353 107 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 MIR124-2-201ENST00000385081 109 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 AL121914.1-201ENST00000450188 156 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 AL627230.5-201ENST00000619807 58 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.89□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 MIR34C-201ENST00000384831 77 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 RNY4P36-201ENST00000391116 96 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 RNU6-381P-201ENST00000391259 108 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 RNU7-123P-201ENST00000515911 60 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 AC090574.1-201ENST00000623186 233 ntBASIC-1.9□□□□□ -2.71
TRAV4A0A0B4J268 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 SNORD115-23-201ENST00000364461 82 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 SNORD101-201ENST00000384027 73 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 RNU6-240P-201ENST00000516098 97 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 RNA5SP236-201ENST00000516169 116 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 RNA5SP461-201ENST00000516451 104 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.91□□□□□ -2.72
TRAV4A0A0B4J268 RNU6-957P-201ENST00000363652 99 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 RNU6-103P-201ENST00000363686 107 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 SNORD116-6-201ENST00000384711 96 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 AC138207.3-201ENST00000585289 166 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 AC132825.6-201ENST00000638861 357 ntBASIC-1.92□□□□□ -2.72
TRAV4A0A0B4J268 RNU6-664P-201ENST00000362381 107 ntBASIC-1.93□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.93□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.93□□□□□ -2.72
TRAV4A0A0B4J268 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.93□□□□□ -2.72
TRAV4A0A0B4J268 RNU6-54P-201ENST00000365563 107 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms