Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 SNORD67.1-201ENST00000516618 108 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU7-137P-201ENST00000516788 62 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-537P-201ENST00000517277 103 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.35□□□□□ -2.19
NR2E3Q9Y5X4 RNU4-67P-201ENST00000364569 141 ntBASIC1.35□□□□□ -2.19
NR2E3Q9Y5X4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.35□□□□□ -2.19
NR2E3Q9Y5X4 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
NR2E3Q9Y5X4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.35□□□□□ -2.19
NR2E3Q9Y5X4 MIR450A1-201ENST00000362262 91 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 MIR206-201ENST00000384872 86 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 MIR605-201ENST00000385078 83 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 SNORD77B-201ENST00000391112 67 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 SNORA19.1-201ENST00000410656 129 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 snoU13.21-201ENST00000459368 105 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 MIR3613-201ENST00000579844 87 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 AL590095.2-201ENST00000604136 117 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 FAM71BP1-201ENST00000604431 523 ntBASIC1.34□□□□□ -2.19
NR2E3Q9Y5X4 SNORD115-35-201ENST00000365122 82 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-949P-201ENST00000384040 107 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 MIR1912-201ENST00000410389 80 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 RNU7-62P-201ENST00000458856 62 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-521P-201ENST00000516663 105 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 AC211469.2-201ENST00000605461 205 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
NR2E3Q9Y5X4 SNORD113.3-201ENST00000364630 78 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 MIR577-201ENST00000385196 96 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 SNORD111-201ENST00000408139 94 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 AC002429.1-201ENST00000437672 148 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 UBL5P1-201ENST00000507979 193 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 RNU7-2P-201ENST00000516096 62 ntBASIC1.32□□□□□ -2.2
NR2E3Q9Y5X4 SNORD114-10-201ENST00000363409 72 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 RPL39P25-201ENST00000449384 154 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 AC106800.4-201ENST00000614905 153 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 AC105081.1-201ENST00000617727 106 ntBASIC1.31□□□□□ -2.2
NR2E3Q9Y5X4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-766P-201ENST00000362478 107 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 SNORA2B-201ENST00000384583 137 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 U8.15-201ENST00000390947 134 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 SNORA7.5-201ENST00000410672 110 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-904P-201ENST00000516206 101 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.3□□□□□ -2.2
NR2E3Q9Y5X4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-409P-201ENST00000384114 104 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 MIR590-201ENST00000385008 97 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-733P-201ENST00000410759 104 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 AL031737.1-201ENST00000450125 223 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 CYP3A137P-201ENST00000562436 69 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 MIR4694-201ENST00000578534 80 ntBASIC1.29□□□□□ -2.2
NR2E3Q9Y5X4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.155-201ENST00000363632 101 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-756P-201ENST00000383997 107 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 SNORA51.5-201ENST00000384126 131 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 MIR34C-201ENST00000384831 77 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 MIR1302-5-201ENST00000408164 150 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 AC023827.1-201ENST00000569247 97 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 MIR376B-201ENST00000614515 100 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
NR2E3Q9Y5X4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-369P-201ENST00000362515 102 ntBASIC1.27□□□□□ -2.21
NR2E3Q9Y5X4 RNY3P2-201ENST00000362918 102 ntBASIC1.27□□□□□ -2.21
NR2E3Q9Y5X4 Y_RNA.377-201ENST00000365644 108 ntBASIC1.27□□□□□ -2.21
NR2E3Q9Y5X4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.27□□□□□ -2.21
NR2E3Q9Y5X4 MT-TF-201ENST00000387314 71 ntBASIC1.27□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-832P-201ENST00000363319 107 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 RNA5SP89-201ENST00000410300 108 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 MIR18B-201ENST00000454574 71 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-109P-201ENST00000516364 107 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-184P-201ENST00000516514 107 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.26□□□□□ -2.21
NR2E3Q9Y5X4 Y_RNA.495-201ENST00000384435 112 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms