Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-1124P-201ENST00000384169 107 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 RNY1P4-201ENST00000384595 115 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 snoU13.9-201ENST00000458927 103 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 AC133485.1-201ENST00000567176 124 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 AC012676.2-201ENST00000619258 186 ntBASIC1.94□□□□□ -2.1
PCDHA11Q9Y5I1 HSBP1P2-201ENST00000299671 229 ntBASIC1.93□□□□□ -2.1
PCDHA11Q9Y5I1 MIR588-201ENST00000384900 83 ntBASIC1.93□□□□□ -2.1
PCDHA11Q9Y5I1 MIR563-201ENST00000385080 79 ntBASIC1.93□□□□□ -2.1
PCDHA11Q9Y5I1 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
PCDHA11Q9Y5I1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 RNY1P2-201ENST00000364820 117 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-396P-201ENST00000365369 105 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 MIR1276-201ENST00000408707 83 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 RNU1-98P-201ENST00000458992 160 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 RNU7-171P-201ENST00000459581 62 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 MTND5P40-201ENST00000559945 246 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 MIR4264-201ENST00000583520 66 ntBASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
PCDHA11Q9Y5I1 SNORA25.3-201ENST00000363205 127 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-392P-201ENST00000364926 101 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 MIR6504-201ENST00000613520 61 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
PCDHA11Q9Y5I1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PCDHA11Q9Y5I1 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 SNORA2B-201ENST00000384583 137 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 MT-TN-201ENST00000387400 73 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.609-201ENST00000410669 89 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 MIR2115-201ENST00000516657 100 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 SNORA4-201ENST00000584302 138 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 MIR6740-201ENST00000618268 113 ntBASIC1.9□□□□□ -2.11
PCDHA11Q9Y5I1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 MIR302D-201ENST00000362275 68 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-1125P-201ENST00000363601 107 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-480P-201ENST00000384332 107 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 RNA5SP225-201ENST00000410874 135 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 RNA5SP395-201ENST00000516567 118 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AP003716.2-201ENST00000528260 108 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AL513043.2-201ENST00000573941 143 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AP000753.3-201ENST00000604083 169 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 AC020891.4-201ENST00000605745 93 ntBASIC1.89□□□□□ -2.11
PCDHA11Q9Y5I1 MIR30D-201ENST00000362283 70 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-633P-201ENST00000362612 103 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-509P-201ENST00000363519 107 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-787P-201ENST00000384032 107 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.426-201ENST00000384068 113 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 MIR181B2-201ENST00000385004 89 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 MIR1255A-201ENST00000408338 113 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-613P-201ENST00000410412 108 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 MIR4666B-201ENST00000578142 81 ntBASIC1.88□□□□□ -2.11
PCDHA11Q9Y5I1 SNORD1A-201ENST00000364968 72 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.611-201ENST00000410682 108 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 AL161932.1-201ENST00000437408 146 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 AC138749.4-201ENST00000563970 127 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 AC090897.1-201ENST00000580909 226 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 AC025521.1-201ENST00000621624 286 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 MIR8063-201ENST00000621930 81 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 AC006160.2-201ENST00000637708 154 ntBASIC1.87□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 AC079140.2-201ENST00000506193 142 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 RNU11-2P-201ENST00000516898 142 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 MIR548BB-201ENST00000626714 66 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 MIR6516-201ENST00000630554 81 ntBASIC1.86□□□□□ -2.11
PCDHA11Q9Y5I1 MIR377-201ENST00000362145 69 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 RNU6-205P-201ENST00000390858 107 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 SNRPGP12-201ENST00000449481 213 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 RNU7-62P-201ENST00000458856 62 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
PCDHA11Q9Y5I1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 RNA5SP133-201ENST00000363368 119 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 Y_RNA.437-201ENST00000384113 113 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 MT-TF-201ENST00000387314 71 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 RPL30P7-201ENST00000479312 323 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 U6.109-201ENST00000636749 87 ntBASIC1.84□□□□□ -2.11
PCDHA11Q9Y5I1 AC008163.1-202ENST00000636004 2889 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 RNA5SP264-201ENST00000363115 107 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 MIR7-2-201ENST00000384970 110 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 MIR4500-201ENST00000579472 76 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms