Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU7-137P-201ENST00000516788 62 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 AC098479.1-201ENST00000609225 154 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 AL365265.1-201ENST00000621045 234 ntBASIC-0.54□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 MIR635-201ENST00000384830 98 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 MIR516B1-201ENST00000385211 90 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 RNU6-381P-201ENST00000391259 108 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 RNU6-735P-201ENST00000410612 107 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 SNORA25.13-201ENST00000516395 103 ntBASIC-0.55□□□□□ -2.5
TREX1Q9NSU2 RNU6-509P-201ENST00000363519 107 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 SNORD42.2-201ENST00000365570 69 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 RNU6-429P-201ENST00000384582 108 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 MIR599-201ENST00000385069 95 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 AL442663.2-201ENST00000554385 511 ntBASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.56□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 SNORD114-10-201ENST00000363409 72 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 RNU4-43P-201ENST00000410628 137 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 SNORD2.1-201ENST00000458762 69 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 RNA5SP484-201ENST00000458857 111 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 MIR4500-201ENST00000579472 76 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 AL359881.1-201ENST00000602916 267 ntBASIC-0.57□□□□□ -2.5
TREX1Q9NSU2 RNU6-865P-201ENST00000364772 107 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 RNU4-17P-201ENST00000365598 141 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 MIR624-201ENST00000385217 97 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 MIR548AE2-201ENST00000583456 67 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 AC093726.3-201ENST00000637588 150 ntBASIC-0.58□□□□□ -2.5
TREX1Q9NSU2 SNORD115-2-201ENST00000362842 82 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 RNU6-103P-201ENST00000363686 107 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 RNU6-978P-201ENST00000364371 103 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 SNORD115-20-201ENST00000365099 82 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 RNU6-47P-201ENST00000383866 107 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 TRAJ51-201ENST00000504127 63 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 AC113195.1-201ENST00000579952 141 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.59□□□□□ -2.5
TREX1Q9NSU2 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 RNU6-449P-201ENST00000383914 107 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 RNU6-474P-201ENST00000384243 107 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 MT-TD-201ENST00000387419 68 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 RNU4-63P-201ENST00000411313 118 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.6□□□□□ -2.51
TREX1Q9NSU2 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 RNU6-455P-201ENST00000384681 107 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 MIR9-2-201ENST00000384838 87 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 SNORD57-201ENST00000448188 72 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 RNU7-188P-201ENST00000517063 64 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 MIR4744-201ENST00000581563 82 ntBASIC-0.61□□□□□ -2.51
TREX1Q9NSU2 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 MIR548AX-201ENST00000580117 73 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 MIR548S-201ENST00000581352 82 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 U2.14-201ENST00000615943 113 ntBASIC-0.62□□□□□ -2.51
TREX1Q9NSU2 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 RNU6-690P-201ENST00000365242 106 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 MT-TQ-201ENST00000387372 72 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 AC097635.1-201ENST00000450678 155 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 RNU7-13P-201ENST00000516413 62 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 RNU6-175P-201ENST00000516896 107 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 MIR4280-201ENST00000582178 76 ntBASIC-0.63□□□□□ -2.51
TREX1Q9NSU2 RNU4-36P-201ENST00000364294 144 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 SNORD56B-201ENST00000384713 71 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 RNY1P7-201ENST00000384743 110 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 MIR181B2-201ENST00000385004 89 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 AL603914.1-201ENST00000401964 204 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 RNU7-74P-201ENST00000459104 62 ntBASIC-0.64□□□□□ -2.51
TREX1Q9NSU2 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 MIR204-201ENST00000385200 110 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 AC022028.1-201ENST00000412054 408 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms