Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC022028.1-201ENST00000412054 408 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 AC096531.1-201ENST00000419107 107 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 MIR4500-201ENST00000579472 76 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 MIR4752-201ENST00000579672 72 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 MIR4282-201ENST00000583613 67 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 AC098479.1-201ENST00000609225 154 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 U6.109-201ENST00000636749 87 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.4□□□□□ -2.47
SHANK3Q9BYB0 RNU4-17P-201ENST00000365598 141 ntBASIC-0.4□□□□□ -2.47
SHANK3Q9BYB0 MIR516B1-201ENST00000385211 90 ntBASIC-0.4□□□□□ -2.47
SHANK3Q9BYB0 AC105081.1-201ENST00000617727 106 ntBASIC-0.4□□□□□ -2.47
SHANK3Q9BYB0 AC134503.1-201ENST00000633048 54 ntBASIC-0.4□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 RNU6-381P-201ENST00000391259 108 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 RNU6-561P-201ENST00000516222 102 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 AC113195.1-201ENST00000579952 141 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 SNORA70.25-201ENST00000612741 95 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 MIR6514-201ENST00000622549 70 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 MIR376A2-201ENST00000636782 80 ntBASIC-0.41□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.41□□□□□ -2.48
SHANK3Q9BYB0 RNU6-450P-201ENST00000364654 107 ntBASIC-0.41□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.41□□□□□ -2.48
SHANK3Q9BYB0 SNORD67.1-201ENST00000516618 108 ntBASIC-0.41□□□□□ -2.48
SHANK3Q9BYB0 RNA5SP403-201ENST00000363598 108 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 MIR548I2-201ENST00000408348 149 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 RNA5SP144-201ENST00000410846 116 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 AL121914.1-201ENST00000450188 156 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 TRAJ51-201ENST00000504127 63 ntBASIC-0.42□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 NAMPTP3-201ENST00000569273 224 ntBASIC-0.43□□□□□ -2.48
SHANK3Q9BYB0 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RNU6-578P-201ENST00000390980 103 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 MIR876-201ENST00000401147 81 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 BX276092.1-201ENST00000427368 251 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RNU6-651P-201ENST00000411040 105 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 AC006210.1-201ENST00000424882 111 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 AC097635.1-201ENST00000450678 155 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RNU7-48P-201ENST00000458875 63 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RNU7-104P-201ENST00000459398 79 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RN7SL660P-201ENST00000614852 299 ntBASIC-0.44□□□□□ -2.48
SHANK3Q9BYB0 RNU4-16P-201ENST00000364737 141 ntBASIC-0.45□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.45□□□□□ -2.48
SHANK3Q9BYB0 RNU6-474P-201ENST00000384243 107 ntBASIC-0.45□□□□□ -2.48
SHANK3Q9BYB0 AL365265.1-201ENST00000621045 234 ntBASIC-0.45□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 MIR599-201ENST00000385069 95 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 AC108059.2-201ENST00000434626 151 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 SNORA25.13-201ENST00000516395 103 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 AC006504.6-201ENST00000590142 199 ntBASIC-0.46□□□□□ -2.48
SHANK3Q9BYB0 RNU6-865P-201ENST00000364772 107 ntBASIC-0.47□□□□□ -2.48
SHANK3Q9BYB0 RNU7-137P-201ENST00000516788 62 ntBASIC-0.47□□□□□ -2.48
SHANK3Q9BYB0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.47□□□□□ -2.48
SHANK3Q9BYB0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.47□□□□□ -2.48
SHANK3Q9BYB0 AC069503.3-201ENST00000618674 145 ntBASIC-0.47□□□□□ -2.48
SHANK3Q9BYB0 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 MIR617-201ENST00000385030 97 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 MTND5P22-201ENST00000458380 195 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 AC082651.2-201ENST00000496833 166 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 FTX_2.1-201ENST00000618816 94 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 AL160413.1-201ENST00000622780 310 ntBASIC-0.47□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 MIR519A1-201ENST00000385257 85 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 RNU6-985P-201ENST00000410182 104 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 RNU6-735P-201ENST00000410612 107 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 RNA5SP236-201ENST00000516169 116 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 MIR548S-201ENST00000581352 82 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 MIR3920-201ENST00000581751 86 ntBASIC-0.48□□□□□ -2.49
SHANK3Q9BYB0 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.49□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.49□□□□□ -2.49
SHANK3Q9BYB0 SNORD114-29-201ENST00000364819 70 ntBASIC-0.49□□□□□ -2.49
SHANK3Q9BYB0 RNU6-690P-201ENST00000365242 106 ntBASIC-0.49□□□□□ -2.49
SHANK3Q9BYB0 MIR181B2-201ENST00000385004 89 ntBASIC-0.49□□□□□ -2.49
SHANK3Q9BYB0 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNY3P14-201ENST00000384309 102 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU6-713P-201ENST00000384761 107 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 MIR4801-201ENST00000582704 82 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 MIR4788-201ENST00000639104 80 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 RNU6-978P-201ENST00000364371 103 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.5□□□□□ -2.49
SHANK3Q9BYB0 SNORD115-35-201ENST00000365122 82 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 317.5 ms