Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 U6.70-201ENST00000620287 104 ntBASIC1.03□□□□□ -2.24
PKP4Q99569 MIR450A1-201ENST00000362262 91 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 Y_RNA.328-201ENST00000365208 113 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 SNORA51.5-201ENST00000384126 131 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 MIR605-201ENST00000385078 83 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 RNU6-679P-201ENST00000391003 106 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 AC036111.3-201ENST00000526389 112 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 MIR4694-201ENST00000578534 80 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 MIR3613-201ENST00000579844 87 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
PKP4Q99569 RNY3P2-201ENST00000362918 102 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 Y_RNA.191-201ENST00000363972 113 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 RNU6-865P-201ENST00000364772 107 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 RNU6-1321P-201ENST00000390905 107 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 AL353813.1-201ENST00000440700 253 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 RNU7-90P-201ENST00000459216 62 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 DEFB131E-201ENST00000532329 154 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 AC133485.1-201ENST00000567176 124 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
PKP4Q99569 uc_338.6-201ENST00000613544 171 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 AC105081.1-201ENST00000617727 106 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 AL512310.12-203ENST00000640543 90 ntBASIC1.01□□□□□ -2.25
PKP4Q99569 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PKP4Q99569 RNU6-1313P-201ENST00000362622 102 ntBASIC1□□□□□ -2.25
PKP4Q99569 Y_RNA.98-201ENST00000363109 102 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-1099P-201ENST00000363533 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU4-36P-201ENST00000364294 144 ntBASIC1□□□□□ -2.25
PKP4Q99569 Y_RNA.224-201ENST00000364308 111 ntBASIC1□□□□□ -2.25
PKP4Q99569 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
PKP4Q99569 Y_RNA.377-201ENST00000365644 108 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-32P-201ENST00000383948 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-1201P-201ENST00000384227 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-13P-201ENST00000384248 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-12P-201ENST00000384604 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-41P-201ENST00000384741 107 ntBASIC1□□□□□ -2.25
PKP4Q99569 MIR577-201ENST00000385196 96 ntBASIC1□□□□□ -2.25
PKP4Q99569 SNORD111-201ENST00000408139 94 ntBASIC1□□□□□ -2.25
PKP4Q99569 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
PKP4Q99569 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU7-48P-201ENST00000458875 63 ntBASIC1□□□□□ -2.25
PKP4Q99569 RNU6-904P-201ENST00000516206 101 ntBASIC1□□□□□ -2.25
PKP4Q99569 AC141557.1-201ENST00000540982 400 ntBASIC1□□□□□ -2.25
PKP4Q99569 AC106800.4-201ENST00000614905 153 ntBASIC1□□□□□ -2.25
PKP4Q99569 Y_RNA.10-201ENST00000362371 110 ntBASIC0.99□□□□□ -2.25
PKP4Q99569 RNU6-832P-201ENST00000363319 107 ntBASIC0.99□□□□□ -2.25
PKP4Q99569 U8.15-201ENST00000390947 134 ntBASIC0.99□□□□□ -2.25
PKP4Q99569 RNU6-1307P-201ENST00000391012 103 ntBASIC0.99□□□□□ -2.25
PKP4Q99569 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.99□□□□□ -2.25
PKP4Q99569 AL442128.1-201ENST00000615151 90 ntBASIC0.99□□□□□ -2.25
PKP4Q99569 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
PKP4Q99569 AC008163.1-202ENST00000636004 2889 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 Y_RNA.495-201ENST00000384435 112 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 Y_RNA.544-201ENST00000384650 113 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 MIR518E-201ENST00000385252 88 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 SNORA19.1-201ENST00000410656 129 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
PKP4Q99569 AC023827.1-201ENST00000569247 97 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 Y_RNA.818-201ENST00000618813 71 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 AP001362.1-201ENST00000625165 124 ntBASIC0.98□□□□□ -2.25
PKP4Q99569 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 RNY1P2-201ENST00000364820 117 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 RNU6-934P-201ENST00000365154 107 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 MIR34C-201ENST00000384831 77 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 MIR590-201ENST00000385008 97 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 SNORD93-201ENST00000408813 74 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 Y_RNA.601-201ENST00000410500 113 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 RNU6-537P-201ENST00000517277 103 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 AC096720.1-201ENST00000604441 183 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 MIR376B-201ENST00000614515 100 ntBASIC0.97□□□□□ -2.25
PKP4Q99569 AC023934.1-201ENST00000574529 2389 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 SNORD38.1-201ENST00000363863 68 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 SNORD38.2-201ENST00000384470 69 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 AC096949.1-201ENST00000412047 152 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 snoU13.21-201ENST00000459368 105 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 SCARNA23-201ENST00000516060 130 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 RNU6-168P-201ENST00000516189 101 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 RNU6-1006P-201ENST00000516998 103 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 AC138749.4-201ENST00000563970 127 ntBASIC0.96□□□□□ -2.26
PKP4Q99569 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PKP4Q99569 SNORD45B-201ENST00000364617 72 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
PKP4Q99569 MIR1257-201ENST00000408490 117 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 RNA5SP89-201ENST00000410300 108 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 RPS26P5-201ENST00000418544 335 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 U6.109-201ENST00000636749 87 ntBASIC0.95□□□□□ -2.26
PKP4Q99569 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PKP4Q99569 Y_RNA.93-201ENST00000363066 109 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms