Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC027335.2-201ENST00000624030 375 ntBASIC1.39□□□□□ -2.19
RTF1Q92541 AL391516.1-201ENST00000554380 2449 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 Y_RNA.163-201ENST00000363702 113 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 U8.15-201ENST00000390947 134 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 MIR1302-5-201ENST00000408164 150 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 AC019288.1-201ENST00000557918 224 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 AC023827.1-201ENST00000569247 97 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
RTF1Q92541 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RTF1Q92541 SNORA63.4-201ENST00000362763 126 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 RNU6-934P-201ENST00000365154 107 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 Y_RNA.448-201ENST00000384185 108 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 RNU6-1321P-201ENST00000390905 107 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 RNU6-679P-201ENST00000391003 106 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 SNORA7.5-201ENST00000410672 110 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 AC133485.1-201ENST00000567176 124 ntBASIC1.37□□□□□ -2.19
RTF1Q92541 RNU6-1313P-201ENST00000362622 102 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 Y_RNA.98-201ENST00000363109 102 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 RNU1-93P-201ENST00000364704 169 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 Y_RNA.360-201ENST00000365512 102 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 RNU6-554P-201ENST00000410466 106 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 AL353813.1-201ENST00000440700 253 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 RNU7-48P-201ENST00000458875 63 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 snoU13.21-201ENST00000459368 105 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 MIR4694-201ENST00000578534 80 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 uc_338.28-201ENST00000612082 187 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 AC105081.1-201ENST00000617727 106 ntBASIC1.36□□□□□ -2.19
RTF1Q92541 Y_RNA.78-201ENST00000362970 110 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 RNU6-865P-201ENST00000364772 107 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 Y_RNA.328-201ENST00000365208 113 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 MIR605-201ENST00000385078 83 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 AC096949.1-201ENST00000412047 152 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 AL031737.1-201ENST00000450125 223 ntBASIC1.35□□□□□ -2.19
RTF1Q92541 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.35□□□□□ -2.19
RTF1Q92541 RNY3P2-201ENST00000362918 102 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 RNU1-36P-201ENST00000365130 165 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 Y_RNA.377-201ENST00000365644 108 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 RNU6-1113P-201ENST00000384348 107 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 RNU6-1307P-201ENST00000391012 103 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 SNORD83.1-201ENST00000411362 77 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 RNU7-185P-201ENST00000459215 60 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 AL512310.12-203ENST00000640543 90 ntBASIC1.34□□□□□ -2.19
RTF1Q92541 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RTF1Q92541 MIR1257-201ENST00000408490 117 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 SNORD93-201ENST00000408813 74 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 RNU6-994P-201ENST00000410507 111 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 MTATP6P29-201ENST00000415057 132 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 AP001362.1-201ENST00000625165 124 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 AC023934.1-201ENST00000574529 2389 ntBASIC1.33□□□□□ -2.2
RTF1Q92541 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
RTF1Q92541 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
RTF1Q92541 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RTF1Q92541 RNU6-766P-201ENST00000362478 107 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 RNU6-1099P-201ENST00000363533 107 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 RNU6-153P-201ENST00000364422 104 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 RNU6-1201P-201ENST00000384227 107 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 MIR577-201ENST00000385196 96 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 MIR4771-2-201ENST00000577758 74 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 MIR4771-1-201ENST00000582617 74 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 MIR376B-201ENST00000614515 100 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 MIR6767-201ENST00000637302 66 ntBASIC1.32□□□□□ -2.2
RTF1Q92541 RNU6-832P-201ENST00000363319 107 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 RNU4-36P-201ENST00000364294 144 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 RNU4-38P-201ENST00000364472 129 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 SNORA51.5-201ENST00000384126 131 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RTF1Q92541 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 AC067940.1-201ENST00000458411 300 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 AC141557.1-201ENST00000540982 400 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 AC138749.4-201ENST00000563970 127 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 MIR4491-201ENST00000581087 68 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 AL442128.1-201ENST00000615151 90 ntBASIC1.31□□□□□ -2.2
RTF1Q92541 Y_RNA.10-201ENST00000362371 110 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 SNORD114-26-201ENST00000363543 72 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 RNU6-756P-201ENST00000383997 107 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 MIR34C-201ENST00000384831 77 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 Y_RNA.588-201ENST00000391254 102 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 UBL5P1-201ENST00000507979 193 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 RNU6-904P-201ENST00000516206 101 ntBASIC1.3□□□□□ -2.2
RTF1Q92541 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RTF1Q92541 Y_RNA.36-201ENST00000362602 112 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 RNU6-147P-201ENST00000383983 107 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 SNORD38.2-201ENST00000384470 69 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 MIR520E-201ENST00000384867 87 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 RNU6-1006P-201ENST00000516998 103 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 DEFB131E-201ENST00000532329 154 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms