Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MIR6086-201ENST00000638065 55 ntBASIC1.03□□□□□ -2.24
KRT28Q7Z3Y7 SNORD116-14-201ENST00000383894 92 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 SNORD116-17-201ENST00000383929 92 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 SNORD116-15-201ENST00000384445 92 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 SNORD116-19-201ENST00000384729 92 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 MIR520F-201ENST00000384824 87 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 RNU7-107P-201ENST00000459121 61 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-406P-201ENST00000516470 107 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 MIR3914-2-201ENST00000637339 95 ntBASIC1.02□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-364P-201ENST00000384387 107 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 U8.15-201ENST00000390947 134 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 SNORD77B-201ENST00000391112 67 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1234P-201ENST00000516877 103 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 MIR4711-201ENST00000578274 70 ntBASIC1.01□□□□□ -2.25
KRT28Q7Z3Y7 SNORD115-19-201ENST00000363098 82 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 SNORD115-18-201ENST00000363293 82 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 SNORD114-2-201ENST00000363953 78 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 SNORD115-17-201ENST00000364612 82 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 MIR938-201ENST00000401216 83 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 AC025166.1-201ENST00000612411 163 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 AC087741.2-201ENST00000619415 172 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 AC132825.6-201ENST00000638861 357 ntBASIC1□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.213-201ENST00000364178 111 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU1-36P-201ENST00000365130 165 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.528-201ENST00000384575 108 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 MIR125B2-201ENST00000385128 89 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-447P-201ENST00000410293 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-355P-201ENST00000410427 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-791P-201ENST00000410467 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-705P-201ENST00000410601 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-860P-201ENST00000410860 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-785P-201ENST00000411324 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU7-137P-201ENST00000516788 62 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU7-156P-201ENST00000517214 74 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 AL359881.1-201ENST00000602916 267 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 U6.90-201ENST00000614007 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 U6.70-201ENST00000620287 104 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 MIR6866-201ENST00000638146 69 ntBASIC0.99□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-403P-201ENST00000363163 104 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 SNORD114-10-201ENST00000363409 72 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.525-201ENST00000384570 113 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-735P-201ENST00000410612 107 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 MIR3163-201ENST00000581592 73 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 SNORD92-201ENST00000585078 85 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 MTND5P18-201ENST00000445624 1801 ntBASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRT28Q7Z3Y7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 Y_RNA.346-201ENST00000365385 112 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 MIR520H-201ENST00000385126 88 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 RNU1-119P-201ENST00000391122 165 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 RNU4-83P-201ENST00000410863 133 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 RNU7-56P-201ENST00000458744 62 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 RNU7-6P-201ENST00000516845 62 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 MIR8066-201ENST00000617280 78 ntBASIC0.97□□□□□ -2.25
KRT28Q7Z3Y7 AL157777.2-201ENST00000258070 137 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 SNORD99-201ENST00000408612 74 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 AC098934.3-201ENST00000430450 190 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 SNORD67.1-201ENST00000516618 108 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 MIR2909-201ENST00000617113 69 ntBASIC0.96□□□□□ -2.26
KRT28Q7Z3Y7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.95□□□□□ -2.26
KRT28Q7Z3Y7 Y_RNA.353-201ENST00000365440 108 ntBASIC0.95□□□□□ -2.26
KRT28Q7Z3Y7 SNORA72.6-201ENST00000384520 129 ntBASIC0.95□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-789P-201ENST00000517105 102 ntBASIC0.95□□□□□ -2.26
KRT28Q7Z3Y7 MIR548D2-201ENST00000384955 97 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 RNU4-61P-201ENST00000411243 107 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 AC008267.6-201ENST00000441664 139 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 RNU7-102P-201ENST00000458948 62 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-1333P-201ENST00000516162 93 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 DEFB131E-201ENST00000532329 154 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 MIR4491-201ENST00000581087 68 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 U6.95-201ENST00000636931 70 ntBASIC0.94□□□□□ -2.26
KRT28Q7Z3Y7 RNA5SP347-201ENST00000362445 119 ntBASIC0.93□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-22P-201ENST00000384355 107 ntBASIC0.93□□□□□ -2.26
KRT28Q7Z3Y7 AC011195.1-201ENST00000578177 177 ntBASIC0.93□□□□□ -2.26
KRT28Q7Z3Y7 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-616P-201ENST00000384353 107 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-1117P-201ENST00000384525 104 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 MIR206-201ENST00000384872 86 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms