Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 U8.15-201ENST00000390947 134 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-447P-201ENST00000410293 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNA5SP237-201ENST00000410414 113 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-355P-201ENST00000410427 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-791P-201ENST00000410467 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-705P-201ENST00000410601 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-860P-201ENST00000410860 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU6-785P-201ENST00000411324 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU7-62P-201ENST00000458856 62 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU7-48P-201ENST00000458875 63 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 RNU7-61P-201ENST00000515897 61 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 U6.90-201ENST00000614007 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 U6.70-201ENST00000620287 104 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 MIR2052-201ENST00000636055 55 ntBASIC1.19□□□□□ -2.22
ZNF549Q6P9A3 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 SNORD38.1-201ENST00000363863 68 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 SNORD45B-201ENST00000364617 72 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 SNORA75.2-201ENST00000391138 150 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 SNORA75.3-201ENST00000391231 150 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 AC109327.2-201ENST00000448339 378 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 AC138749.4-201ENST00000563970 127 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 RNU6-844P-201ENST00000517175 102 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 AC006254.2-201ENST00000603259 279 ntBASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF549Q6P9A3 HSBP1P2-201ENST00000299671 229 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 RNU6-865P-201ENST00000364772 107 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 RNY1P2-201ENST00000364820 117 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 RNU6-294P-201ENST00000364999 102 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 MT-TF-201ENST00000387314 71 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 MIR4439-201ENST00000583746 80 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 AC020891.4-201ENST00000605745 93 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 U7.3-201ENST00000616123 62 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 AP001362.1-201ENST00000625165 124 ntBASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF549Q6P9A3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF549Q6P9A3 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
ZNF549Q6P9A3 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
ZNF549Q6P9A3 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
ZNF549Q6P9A3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 RNU6-162P-201ENST00000516228 103 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 RNU6-762P-201ENST00000517107 102 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 AC133485.1-201ENST00000567176 124 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 AC096720.1-201ENST00000604441 183 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 SNORD73B-201ENST00000364394 72 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 RNU6-813P-201ENST00000384691 107 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 MIR18B-201ENST00000454574 71 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 RNU6-86P-201ENST00000606534 107 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 SNORA2B-201ENST00000384583 137 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 RNU6-887P-201ENST00000410660 100 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 AC090897.1-201ENST00000580909 226 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 MIR4491-201ENST00000581087 68 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 RNU6-90P-201ENST00000606352 106 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 AC103810.7-201ENST00000607821 91 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 U6.109-201ENST00000636749 87 ntBASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ZNF549Q6P9A3 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
ZNF549Q6P9A3 RNA5SP133-201ENST00000363368 119 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms