Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU6-705P-201ENST00000410601 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-1100P-201ENST00000410691 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-860P-201ENST00000410860 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-1217P-201ENST00000411276 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-785P-201ENST00000411324 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 MIR4439-201ENST00000583746 80 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 U6.90-201ENST00000614007 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 U6.70-201ENST00000620287 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 MIR494-201ENST00000349529 81 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR103A2-201ENST00000362154 78 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR30D-201ENST00000362283 70 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 Y_RNA.17-201ENST00000362433 111 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR450A2-201ENST00000385022 100 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 RNU6-972P-201ENST00000391208 107 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR548G-201ENST00000408442 89 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR2115-201ENST00000516657 100 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR3664-201ENST00000579074 99 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR3937-201ENST00000580135 106 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR4264-201ENST00000583520 66 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 AP000753.3-201ENST00000604083 169 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 AC103810.7-201ENST00000607821 91 ntBASIC1.69□□□□□ -2.14
NKX3-2P78367 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
NKX3-2P78367 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 RNU6-1165P-201ENST00000410119 107 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 SPINT5P-201ENST00000448174 155 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 AC245517.4-201ENST00000448601 281 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 RNU7-62P-201ENST00000458856 62 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 RN7SKP12-201ENST00000516275 143 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 AC133485.1-201ENST00000567176 124 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 RNU6-90P-201ENST00000606352 106 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 AP001362.1-201ENST00000625165 124 ntBASIC1.68□□□□□ -2.14
NKX3-2P78367 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NKX3-2P78367 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NKX3-2P78367 Y_RNA.96-201ENST00000363092 109 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 RNA5SP173-201ENST00000364857 136 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 SNORD58A-201ENST00000383875 65 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 Y_RNA.567-201ENST00000384736 106 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 MT-TN-201ENST00000387400 73 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
NKX3-2P78367 AC020891.4-201ENST00000605745 93 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 AC012676.2-201ENST00000619258 186 ntBASIC1.67□□□□□ -2.14
NKX3-2P78367 RNU6-1244P-201ENST00000363614 108 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 RNU6-592P-201ENST00000411333 103 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 RNU1-123P-201ENST00000458950 160 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.66□□□□□ -2.14
NKX3-2P78367 AL512310.8-201ENST00000550183 120 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 AC138749.4-201ENST00000563970 127 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 SNORA4-201ENST00000584302 138 ntBASIC1.66□□□□□ -2.14
NKX3-2P78367 Y_RNA.168-201ENST00000363740 102 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RNY1P2-201ENST00000364820 117 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RNU6-573P-201ENST00000383938 106 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RNU6-1065P-201ENST00000384513 106 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RNU6-613P-201ENST00000410412 108 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RPL30P7-201ENST00000479312 323 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 RNU11-2P-201ENST00000516898 142 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 MTND5P40-201ENST00000559945 246 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 AC090897.1-201ENST00000580909 226 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.65□□□□□ -2.15
NKX3-2P78367 SNORD33-201ENST00000362761 85 ntBASIC1.64□□□□□ -2.15
NKX3-2P78367 Y_RNA.173-201ENST00000363776 113 ntBASIC1.64□□□□□ -2.15
NKX3-2P78367 RNU6-820P-201ENST00000384273 107 ntBASIC1.64□□□□□ -2.15
NKX3-2P78367 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
NKX3-2P78367 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
NKX3-2P78367 U6.109-201ENST00000636749 87 ntBASIC1.64□□□□□ -2.15
NKX3-2P78367 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 SNORD38.2-201ENST00000384470 69 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NKX3-2P78367 RNU6-402P-201ENST00000410678 103 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 RPS27P16-201ENST00000425758 201 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 RNU6-267P-201ENST00000516714 103 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
NKX3-2P78367 HSBP1P2-201ENST00000299671 229 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 MIR377-201ENST00000362145 69 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 RNA5SP133-201ENST00000363368 119 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 SNORD116-10-201ENST00000363791 102 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 RNU6-580P-201ENST00000365159 107 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 SNORA2B-201ENST00000384583 137 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.62□□□□□ -2.15
NKX3-2P78367 MIR4500-201ENST00000579472 76 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
NKX3-2P78367 Y_RNA.73-201ENST00000362910 113 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 RNU6-53P-201ENST00000365367 106 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 RNU6-1152P-201ENST00000384576 107 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 MIR181B2-201ENST00000385004 89 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 snoU13.21-201ENST00000459368 105 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.61□□□□□ -2.15
NKX3-2P78367 Y_RNA.119-201ENST00000363301 96 ntBASIC1.6□□□□□ -2.15
NKX3-2P78367 RNY1P1-201ENST00000364372 112 ntBASIC1.6□□□□□ -2.15
NKX3-2P78367 RNU6-219P-201ENST00000364728 107 ntBASIC1.6□□□□□ -2.15
NKX3-2P78367 SNORD116-22-201ENST00000384430 92 ntBASIC1.6□□□□□ -2.15
NKX3-2P78367 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
NKX3-2P78367 MIR489-201ENST00000384923 84 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 401 ms