Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HSBP1P2-201ENST00000299671 229 ntBASIC1.85□□□□□ -2.11
YBX1P67809 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
YBX1P67809 RNU6-524P-201ENST00000384270 107 ntBASIC1.85□□□□□ -2.11
YBX1P67809 MIR519C-201ENST00000385053 87 ntBASIC1.85□□□□□ -2.11
YBX1P67809 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
YBX1P67809 RNU6-519P-201ENST00000410590 108 ntBASIC1.85□□□□□ -2.11
YBX1P67809 RNU6-321P-201ENST00000410912 106 ntBASIC1.85□□□□□ -2.11
YBX1P67809 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
YBX1P67809 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
YBX1P67809 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
YBX1P67809 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
YBX1P67809 SNORD115-37-201ENST00000363768 82 ntBASIC1.84□□□□□ -2.11
YBX1P67809 AC093729.1-201ENST00000513074 128 ntBASIC1.84□□□□□ -2.11
YBX1P67809 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.84□□□□□ -2.11
YBX1P67809 MIR8066-201ENST00000617280 78 ntBASIC1.84□□□□□ -2.11
YBX1P67809 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
YBX1P67809 U6.109-201ENST00000636749 87 ntBASIC1.84□□□□□ -2.11
YBX1P67809 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
YBX1P67809 Y_RNA.316-201ENST00000365118 111 ntBASIC1.83□□□□□ -2.12
YBX1P67809 MIR583-201ENST00000384846 75 ntBASIC1.83□□□□□ -2.12
YBX1P67809 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
YBX1P67809 MIR1302-7-201ENST00000408841 72 ntBASIC1.83□□□□□ -2.12
YBX1P67809 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
YBX1P67809 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
YBX1P67809 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
YBX1P67809 AC138749.4-201ENST00000563970 127 ntBASIC1.83□□□□□ -2.12
YBX1P67809 SNORA4-201ENST00000584302 138 ntBASIC1.83□□□□□ -2.12
YBX1P67809 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
YBX1P67809 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
YBX1P67809 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
YBX1P67809 MIR6740-201ENST00000618268 113 ntBASIC1.83□□□□□ -2.12
YBX1P67809 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
YBX1P67809 Y_RNA.57-201ENST00000362806 113 ntBASIC1.82□□□□□ -2.12
YBX1P67809 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
YBX1P67809 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
YBX1P67809 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
YBX1P67809 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
YBX1P67809 MIR4264-201ENST00000583520 66 ntBASIC1.82□□□□□ -2.12
YBX1P67809 MIR8074-201ENST00000615081 81 ntBASIC1.82□□□□□ -2.12
YBX1P67809 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
YBX1P67809 Y_RNA.119-201ENST00000363301 96 ntBASIC1.81□□□□□ -2.12
YBX1P67809 RNA5SP133-201ENST00000363368 119 ntBASIC1.81□□□□□ -2.12
YBX1P67809 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
YBX1P67809 MIR563-201ENST00000385080 79 ntBASIC1.81□□□□□ -2.12
YBX1P67809 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
YBX1P67809 RNU6-1165P-201ENST00000410119 107 ntBASIC1.81□□□□□ -2.12
YBX1P67809 RNU4-83P-201ENST00000410863 133 ntBASIC1.81□□□□□ -2.12
YBX1P67809 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
YBX1P67809 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
YBX1P67809 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
YBX1P67809 MIR4662A-201ENST00000637499 67 ntBASIC1.81□□□□□ -2.12
YBX1P67809 BX276092.1-201ENST00000427368 251 ntBASIC1.8□□□□□ -2.12
YBX1P67809 RNU7-62P-201ENST00000458856 62 ntBASIC1.8□□□□□ -2.12
YBX1P67809 MIR2115-201ENST00000516657 100 ntBASIC1.8□□□□□ -2.12
YBX1P67809 RNU6-850P-201ENST00000516934 103 ntBASIC1.8□□□□□ -2.12
YBX1P67809 AC019288.1-201ENST00000557918 224 ntBASIC1.8□□□□□ -2.12
YBX1P67809 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
YBX1P67809 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
YBX1P67809 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
YBX1P67809 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
YBX1P67809 MIR30D-201ENST00000362283 70 ntBASIC1.79□□□□□ -2.12
YBX1P67809 RNU6-1296P-201ENST00000383879 107 ntBASIC1.79□□□□□ -2.12
YBX1P67809 MIR7-2-201ENST00000384970 110 ntBASIC1.79□□□□□ -2.12
YBX1P67809 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
YBX1P67809 SNRPGP12-201ENST00000449481 213 ntBASIC1.79□□□□□ -2.12
YBX1P67809 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
YBX1P67809 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
YBX1P67809 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
YBX1P67809 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
YBX1P67809 RNU4-32P-201ENST00000363404 141 ntBASIC1.78□□□□□ -2.12
YBX1P67809 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
YBX1P67809 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
YBX1P67809 AC087499.7-201ENST00000441958 109 ntBASIC1.78□□□□□ -2.12
YBX1P67809 snoU13.25-201ENST00000458945 104 ntBASIC1.78□□□□□ -2.12
YBX1P67809 AL133373.1-201ENST00000497098 94 ntBASIC1.78□□□□□ -2.12
YBX1P67809 RNU7-153P-201ENST00000516455 62 ntBASIC1.78□□□□□ -2.12
YBX1P67809 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
YBX1P67809 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
YBX1P67809 Y_RNA.94-201ENST00000363068 106 ntBASIC1.77□□□□□ -2.13
YBX1P67809 RNU6-571P-201ENST00000384128 107 ntBASIC1.77□□□□□ -2.13
YBX1P67809 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
YBX1P67809 MIR1236-201ENST00000408340 102 ntBASIC1.77□□□□□ -2.13
YBX1P67809 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
YBX1P67809 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
YBX1P67809 RNU6-250P-201ENST00000516958 103 ntBASIC1.77□□□□□ -2.13
YBX1P67809 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
YBX1P67809 AL512598.1-201ENST00000610158 273 ntBASIC1.77□□□□□ -2.13
YBX1P67809 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
YBX1P67809 AL359851.1-201ENST00000569460 4997 ntBASIC1.76□□□□□ -2.13
YBX1P67809 MT-TN-201ENST00000387400 73 ntBASIC1.76□□□□□ -2.13
YBX1P67809 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.76□□□□□ -2.13
YBX1P67809 SNORD4B-201ENST00000459083 72 ntBASIC1.76□□□□□ -2.13
YBX1P67809 AC140658.3-201ENST00000567603 271 ntBASIC1.76□□□□□ -2.13
YBX1P67809 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
YBX1P67809 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.76□□□□□ -2.13
YBX1P67809 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
YBX1P67809 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
YBX1P67809 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
YBX1P67809 MIR103A2-201ENST00000362154 78 ntBASIC1.75□□□□□ -2.13
YBX1P67809 RNU6-776P-201ENST00000364403 104 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms