Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 U6.90-201ENST00000614007 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 U6.70-201ENST00000620287 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.06□□□□□ -2.24
ERVFC1-1P60608 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.4-201ENST00000362333 112 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.10-201ENST00000362371 110 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 MT-TF-201ENST00000387314 71 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 RNU4-62P-201ENST00000410125 130 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.659-201ENST00000515994 113 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 AC019288.1-201ENST00000557918 224 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 AC138749.4-201ENST00000563970 127 ntBASIC1.05□□□□□ -2.24
ERVFC1-1P60608 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.95-201ENST00000363079 95 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.98-201ENST00000363109 102 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 SNORD38.1-201ENST00000363863 68 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 SNORD45B-201ENST00000364617 72 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNY1P2-201ENST00000364820 117 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6-1131P-201ENST00000364955 107 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.342-201ENST00000365352 113 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6-49P-201ENST00000384256 107 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.467-201ENST00000384297 102 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6-910P-201ENST00000390844 107 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 MIR1323-201ENST00000408090 73 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU7-61P-201ENST00000515897 61 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 AC133485.1-201ENST00000567176 124 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 MIR4303-201ENST00000581299 66 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 AP001362.1-201ENST00000625165 124 ntBASIC1.04□□□□□ -2.24
ERVFC1-1P60608 RNU6-1163P-201ENST00000364516 107 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 SNORD113.3-201ENST00000364630 78 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 RNU6-60P-201ENST00000364792 103 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 RNU6-644P-201ENST00000391155 98 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 AC109327.2-201ENST00000448339 378 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 MIR18B-201ENST00000454574 71 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.03□□□□□ -2.24
ERVFC1-1P60608 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 SNORD79.1-201ENST00000516069 84 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 AC068338.1-201ENST00000565567 176 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 AL359821.1-201ENST00000605519 182 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 MIR2052-201ENST00000636055 55 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 U6.109-201ENST00000636749 87 ntBASIC1.03□□□□□ -2.24
ERVFC1-1P60608 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.25
ERVFC1-1P60608 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
ERVFC1-1P60608 RNY1P7-201ENST00000384743 110 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 Y_RNA.588-201ENST00000391254 102 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 RNA5SP247-201ENST00000411181 105 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 SNORD83.1-201ENST00000411362 77 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AP1B1P2-201ENST00000416196 106 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AC096720.1-201ENST00000604441 183 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 AL157834.3-201ENST00000615543 103 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 MALAT1.1-201ENST00000618249 95 ntBASIC1.02□□□□□ -2.25
ERVFC1-1P60608 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 RNA5SP133-201ENST00000363368 119 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 Y_RNA.290-201ENST00000364879 114 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 RNU1-36P-201ENST00000365130 165 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 MIR548G-201ENST00000408442 89 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 AC015818.7-201ENST00000428754 109 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 AC087499.7-201ENST00000441958 109 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 RNU7-95P-201ENST00000459222 64 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 AC090897.1-201ENST00000580909 226 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 MIR4491-201ENST00000581087 68 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 MIR4679-1-201ENST00000637619 75 ntBASIC1.01□□□□□ -2.25
ERVFC1-1P60608 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 Y_RNA.119-201ENST00000363301 96 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 Y_RNA.173-201ENST00000363776 113 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 SNORD93-201ENST00000408813 74 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 RNU7-185P-201ENST00000459215 60 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 MIR4439-201ENST00000583746 80 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 RNU6-90P-201ENST00000606352 106 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 RNU6-86P-201ENST00000606534 107 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 U7.3-201ENST00000616123 62 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 AC023934.1-201ENST00000574529 2389 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 AC008163.1-202ENST00000636004 2889 ntBASIC1□□□□□ -2.25
ERVFC1-1P60608 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
ERVFC1-1P60608 RNU6-369P-201ENST00000362515 102 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 RNU6-934P-201ENST00000365154 107 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 RNU6-813P-201ENST00000384691 107 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 SPINT5P-201ENST00000448174 155 ntBASIC0.99□□□□□ -2.25
ERVFC1-1P60608 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.99□□□□□ -2.25
ERVFC1-1P60608 RNU6-162P-201ENST00000516228 103 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms