Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
CCNFP41002 MIR337-201ENST00000362281 93 ntBASIC1.71□□□□□ -2.14
CCNFP41002 RNU6-403P-201ENST00000363163 104 ntBASIC1.71□□□□□ -2.14
CCNFP41002 RNY1P2-201ENST00000364820 117 ntBASIC1.71□□□□□ -2.14
CCNFP41002 SNORA72.6-201ENST00000384520 129 ntBASIC1.71□□□□□ -2.14
CCNFP41002 SNORD83.1-201ENST00000411362 77 ntBASIC1.71□□□□□ -2.14
CCNFP41002 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
CCNFP41002 AC023934.1-201ENST00000574529 2389 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-1163P-201ENST00000364516 107 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-1134P-201ENST00000365156 101 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-813P-201ENST00000384691 107 ntBASIC1.7□□□□□ -2.14
CCNFP41002 Y_RNA.567-201ENST00000384736 106 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-910P-201ENST00000390844 107 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-887P-201ENST00000410660 100 ntBASIC1.7□□□□□ -2.14
CCNFP41002 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
CCNFP41002 AC015818.7-201ENST00000428754 109 ntBASIC1.7□□□□□ -2.14
CCNFP41002 AC087499.7-201ENST00000441958 109 ntBASIC1.7□□□□□ -2.14
CCNFP41002 RNU6-844P-201ENST00000517175 102 ntBASIC1.7□□□□□ -2.14
CCNFP41002 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
CCNFP41002 Y_RNA.119-201ENST00000363301 96 ntBASIC1.69□□□□□ -2.14
CCNFP41002 SNORD113.3-201ENST00000364630 78 ntBASIC1.69□□□□□ -2.14
CCNFP41002 Y_RNA.363-201ENST00000365529 113 ntBASIC1.69□□□□□ -2.14
CCNFP41002 MIR1287-201ENST00000408492 90 ntBASIC1.69□□□□□ -2.14
CCNFP41002 MIR18B-201ENST00000454574 71 ntBASIC1.69□□□□□ -2.14
CCNFP41002 MIR4255-201ENST00000579351 72 ntBASIC1.69□□□□□ -2.14
CCNFP41002 MIR4439-201ENST00000583746 80 ntBASIC1.69□□□□□ -2.14
CCNFP41002 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
CCNFP41002 AC103810.7-201ENST00000607821 91 ntBASIC1.69□□□□□ -2.14
CCNFP41002 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCNFP41002 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
CCNFP41002 RNU6-580P-201ENST00000365159 107 ntBASIC1.68□□□□□ -2.14
CCNFP41002 Y_RNA.558-201ENST00000384685 113 ntBASIC1.68□□□□□ -2.14
CCNFP41002 RNU6-972P-201ENST00000391208 107 ntBASIC1.68□□□□□ -2.14
CCNFP41002 AL591704.2-201ENST00000421658 181 ntBASIC1.68□□□□□ -2.14
CCNFP41002 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
CCNFP41002 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.68□□□□□ -2.14
CCNFP41002 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.68□□□□□ -2.14
CCNFP41002 Y_RNA.190-201ENST00000363964 101 ntBASIC1.67□□□□□ -2.14
CCNFP41002 MIR1257-201ENST00000408490 117 ntBASIC1.67□□□□□ -2.14
CCNFP41002 BX276092.1-201ENST00000427368 251 ntBASIC1.67□□□□□ -2.14
CCNFP41002 AC036111.3-201ENST00000526389 112 ntBASIC1.67□□□□□ -2.14
CCNFP41002 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
CCNFP41002 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCNFP41002 SNORD73B-201ENST00000364394 72 ntBASIC1.66□□□□□ -2.14
CCNFP41002 RNU1-36P-201ENST00000365130 165 ntBASIC1.66□□□□□ -2.14
CCNFP41002 RNU6-934P-201ENST00000365154 107 ntBASIC1.66□□□□□ -2.14
CCNFP41002 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.66□□□□□ -2.14
CCNFP41002 AC026421.1-201ENST00000519101 163 ntBASIC1.66□□□□□ -2.14
CCNFP41002 MIR4771-2-201ENST00000577758 74 ntBASIC1.66□□□□□ -2.14
CCNFP41002 MIR4491-201ENST00000581087 68 ntBASIC1.66□□□□□ -2.14
CCNFP41002 MIR4771-1-201ENST00000582617 74 ntBASIC1.66□□□□□ -2.14
CCNFP41002 RNY1P10-201ENST00000363268 113 ntBASIC1.65□□□□□ -2.15
CCNFP41002 RNU6-53P-201ENST00000365367 106 ntBASIC1.65□□□□□ -2.15
CCNFP41002 MIR222-201ENST00000384992 110 ntBASIC1.65□□□□□ -2.15
CCNFP41002 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCNFP41002 RNU6-994P-201ENST00000410507 111 ntBASIC1.65□□□□□ -2.15
CCNFP41002 RNU4-83P-201ENST00000410863 133 ntBASIC1.65□□□□□ -2.15
CCNFP41002 RNU7-185P-201ENST00000459215 60 ntBASIC1.65□□□□□ -2.15
CCNFP41002 RNU6-531P-201ENST00000516694 104 ntBASIC1.65□□□□□ -2.15
CCNFP41002 SNORA25.16-201ENST00000516741 121 ntBASIC1.65□□□□□ -2.15
CCNFP41002 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
CCNFP41002 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
CCNFP41002 RNU6-1244P-201ENST00000363614 108 ntBASIC1.64□□□□□ -2.15
CCNFP41002 SNORA80D-201ENST00000384488 135 ntBASIC1.64□□□□□ -2.15
CCNFP41002 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
CCNFP41002 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
CCNFP41002 SNORA70.22-201ENST00000517160 124 ntBASIC1.64□□□□□ -2.15
CCNFP41002 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.64□□□□□ -2.15
CCNFP41002 AC008163.1-202ENST00000636004 2889 ntBASIC1.63□□□□□ -2.15
CCNFP41002 MIR378A-201ENST00000362177 66 ntBASIC1.63□□□□□ -2.15
CCNFP41002 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.63□□□□□ -2.15
CCNFP41002 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
CCNFP41002 RNU7-21P-201ENST00000459430 62 ntBASIC1.63□□□□□ -2.15
CCNFP41002 RNU6-762P-201ENST00000517107 102 ntBASIC1.63□□□□□ -2.15
CCNFP41002 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.63□□□□□ -2.15
CCNFP41002 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
CCNFP41002 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCNFP41002 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCNFP41002 Y_RNA.173-201ENST00000363776 113 ntBASIC1.62□□□□□ -2.15
CCNFP41002 SNORD58A-201ENST00000383875 65 ntBASIC1.62□□□□□ -2.15
CCNFP41002 MIR181B2-201ENST00000385004 89 ntBASIC1.62□□□□□ -2.15
CCNFP41002 SNORD111-201ENST00000408139 94 ntBASIC1.62□□□□□ -2.15
CCNFP41002 RNU7-90P-201ENST00000459216 62 ntBASIC1.62□□□□□ -2.15
CCNFP41002 AC106800.4-201ENST00000614905 153 ntBASIC1.62□□□□□ -2.15
CCNFP41002 MIR7111-201ENST00000619751 72 ntBASIC1.62□□□□□ -2.15
CCNFP41002 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
CCNFP41002 HSBP1P2-201ENST00000299671 229 ntBASIC1.61□□□□□ -2.15
CCNFP41002 RNU4-58P-201ENST00000363192 141 ntBASIC1.61□□□□□ -2.15
CCNFP41002 RNU6-1125P-201ENST00000363601 107 ntBASIC1.61□□□□□ -2.15
CCNFP41002 RNU6-480P-201ENST00000384332 107 ntBASIC1.61□□□□□ -2.15
CCNFP41002 Y_RNA.588-201ENST00000391254 102 ntBASIC1.61□□□□□ -2.15
CCNFP41002 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
CCNFP41002 SNORA72.7-201ENST00000516349 94 ntBASIC1.61□□□□□ -2.15
CCNFP41002 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
CCNFP41002 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
CCNFP41002 Y_RNA.57-201ENST00000362806 113 ntBASIC1.6□□□□□ -2.15
CCNFP41002 SNORD116-10-201ENST00000363791 102 ntBASIC1.6□□□□□ -2.15
CCNFP41002 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
CCNFP41002 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
CCNFP41002 SNORD79.1-201ENST00000516069 84 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 264.8 ms