Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPS26P5-201ENST00000418544 335 ntBASIC0.79□□□□□ -2.28
SHC1P29353 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.79□□□□□ -2.28
SHC1P29353 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
SHC1P29353 RNU7-2P-201ENST00000516096 62 ntBASIC0.79□□□□□ -2.28
SHC1P29353 AC068339.1-201ENST00000526965 141 ntBASIC0.79□□□□□ -2.28
SHC1P29353 AL162726.3-218ENST00000636401 95 ntBASIC0.79□□□□□ -2.28
SHC1P29353 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
SHC1P29353 RNU4-67P-201ENST00000364569 141 ntBASIC0.78□□□□□ -2.28
SHC1P29353 U8.6-201ENST00000364939 135 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MT-TF-201ENST00000387314 71 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RNU6-816P-201ENST00000390914 107 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RNU6-1268P-201ENST00000391214 107 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RNU6-1239P-201ENST00000391310 107 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RNU7-185P-201ENST00000459215 60 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MIR4771-2-201ENST00000577758 74 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MIR5009-201ENST00000578736 100 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MIR4491-201ENST00000581087 68 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MIR4771-1-201ENST00000582617 74 ntBASIC0.78□□□□□ -2.28
SHC1P29353 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
SHC1P29353 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SHC1P29353 RNU6-1014P-201ENST00000383940 103 ntBASIC0.77□□□□□ -2.29
SHC1P29353 Y_RNA.448-201ENST00000384185 108 ntBASIC0.77□□□□□ -2.29
SHC1P29353 MIR518E-201ENST00000385252 88 ntBASIC0.77□□□□□ -2.29
SHC1P29353 Y_RNA.588-201ENST00000391254 102 ntBASIC0.77□□□□□ -2.29
SHC1P29353 SNORD93-201ENST00000408813 74 ntBASIC0.77□□□□□ -2.29
SHC1P29353 AL035461.1-201ENST00000421490 332 ntBASIC0.77□□□□□ -2.29
SHC1P29353 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
SHC1P29353 RPS29P1-201ENST00000465274 159 ntBASIC0.77□□□□□ -2.29
SHC1P29353 RNU6-919P-201ENST00000516731 104 ntBASIC0.77□□□□□ -2.29
SHC1P29353 SNORA63.4-201ENST00000362763 126 ntBASIC0.76□□□□□ -2.29
SHC1P29353 Y_RNA.155-201ENST00000363632 101 ntBASIC0.76□□□□□ -2.29
SHC1P29353 Y_RNA.309-201ENST00000365046 111 ntBASIC0.76□□□□□ -2.29
SHC1P29353 Y_RNA.323-201ENST00000365157 109 ntBASIC0.76□□□□□ -2.29
SHC1P29353 RNU6-106P-201ENST00000384405 107 ntBASIC0.76□□□□□ -2.29
SHC1P29353 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
SHC1P29353 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SHC1P29353 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
SHC1P29353 MIR1912-201ENST00000410389 80 ntBASIC0.76□□□□□ -2.29
SHC1P29353 RPL39P25-201ENST00000449384 154 ntBASIC0.76□□□□□ -2.29
SHC1P29353 AC138749.4-201ENST00000563970 127 ntBASIC0.76□□□□□ -2.29
SHC1P29353 MIR3613-201ENST00000579844 87 ntBASIC0.76□□□□□ -2.29
SHC1P29353 MIR4676-201ENST00000583078 72 ntBASIC0.76□□□□□ -2.29
SHC1P29353 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
SHC1P29353 MIR376B-201ENST00000614515 100 ntBASIC0.76□□□□□ -2.29
SHC1P29353 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SHC1P29353 Y_RNA.247-201ENST00000364500 92 ntBASIC0.75□□□□□ -2.29
SHC1P29353 SNORD114-24-201ENST00000365029 72 ntBASIC0.75□□□□□ -2.29
SHC1P29353 Y_RNA.328-201ENST00000365208 113 ntBASIC0.75□□□□□ -2.29
SHC1P29353 Y_RNA.360-201ENST00000365512 102 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU6-409P-201ENST00000384114 104 ntBASIC0.75□□□□□ -2.29
SHC1P29353 Y_RNA.507-201ENST00000384500 99 ntBASIC0.75□□□□□ -2.29
SHC1P29353 MIR34C-201ENST00000384831 77 ntBASIC0.75□□□□□ -2.29
SHC1P29353 MIR125B2-201ENST00000385128 89 ntBASIC0.75□□□□□ -2.29
SHC1P29353 MIR577-201ENST00000385196 96 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU6-994P-201ENST00000410507 111 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU7-48P-201ENST00000458875 63 ntBASIC0.75□□□□□ -2.29
SHC1P29353 RNU6-412P-201ENST00000516434 106 ntBASIC0.75□□□□□ -2.29
SHC1P29353 SNORA25.16-201ENST00000516741 121 ntBASIC0.75□□□□□ -2.29
SHC1P29353 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
SHC1P29353 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
SHC1P29353 Y_RNA.49-201ENST00000362714 112 ntBASIC0.74□□□□□ -2.29
SHC1P29353 RNU6-403P-201ENST00000363163 104 ntBASIC0.74□□□□□ -2.29
SHC1P29353 RNA5SP133-201ENST00000363368 119 ntBASIC0.74□□□□□ -2.29
SHC1P29353 RNU6-1099P-201ENST00000363533 107 ntBASIC0.74□□□□□ -2.29
SHC1P29353 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
SHC1P29353 Y_RNA.355-201ENST00000365462 98 ntBASIC0.74□□□□□ -2.29
SHC1P29353 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
SHC1P29353 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
SHC1P29353 MIR1827-201ENST00000408549 66 ntBASIC0.74□□□□□ -2.29
SHC1P29353 SNORA19.1-201ENST00000410656 129 ntBASIC0.74□□□□□ -2.29
SHC1P29353 RNU6-1018P-201ENST00000516577 106 ntBASIC0.74□□□□□ -2.29
SHC1P29353 RNU7-156P-201ENST00000517214 74 ntBASIC0.74□□□□□ -2.29
SHC1P29353 AC133485.1-201ENST00000567176 124 ntBASIC0.74□□□□□ -2.29
SHC1P29353 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
SHC1P29353 AL078603.1-201ENST00000603824 313 ntBASIC0.74□□□□□ -2.29
SHC1P29353 U6.109-201ENST00000636749 87 ntBASIC0.74□□□□□ -2.29
SHC1P29353 Y_RNA.13-201ENST00000362403 112 ntBASIC0.73□□□□□ -2.29
SHC1P29353 Y_RNA.98-201ENST00000363109 102 ntBASIC0.73□□□□□ -2.29
SHC1P29353 Y_RNA.119-201ENST00000363301 96 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNY1P2-201ENST00000364820 117 ntBASIC0.73□□□□□ -2.29
SHC1P29353 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
SHC1P29353 MIR1257-201ENST00000408490 117 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-447P-201ENST00000410293 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1118P-201ENST00000410382 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1076P-201ENST00000410397 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-355P-201ENST00000410427 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-554P-201ENST00000410466 106 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-791P-201ENST00000410467 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-705P-201ENST00000410601 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1100P-201ENST00000410691 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-860P-201ENST00000410860 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU4-83P-201ENST00000410863 133 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1217P-201ENST00000411276 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-785P-201ENST00000411324 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.73□□□□□ -2.29
SHC1P29353 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms